Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 seq28 86.0 6e-12 >seq19 Length=2486755 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | |||| || || || || || ||||||||||| | | ||||| | ||| Sbjct 1821816 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCT 1821757 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| |||| | |||||||||||||| || || || || || ||| Sbjct 1821756 TCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCT 1821697 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| || | || || | || ||||| | || | ||| Sbjct 1821696 TGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTC 1821637 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||||| || || |||||||| ||||| Sbjct 1821636 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 64259 TGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGC 64318 ||||||||||| || | | |||||| ||||||| ||||||||||| ||| | || | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 64319 CGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT 64378 ||||||||||| |||||||| || || || || || || || ||| || || | Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 64379 GTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATT 64438 |||||| | ||||| || | || | |||||| || || | || || ||||| || Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 64439 TGCAT 64443 ||||| Sbjct 1820605 TGCAT 1820601 >seq28 Length=3612999 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | || ||||| | |||||||||||||| |||||| | || Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || |||||||||||||| || || || || || || || || || ||| ||| || Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || || || || || | || | ||||||||| || | || || |||||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 1575472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644425266400