Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq17 156 4e-33 >seq17 Length=3189086 Score = 156 bits (172), Expect = 4e-33 Identities = 362/533 (68%), Gaps = 37/533 (7%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| ||||||| ||||| | ||||| || |||||| | |||| | Sbjct 3106026 GTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCG---GACAAGGAG 3106082 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| | || ||||| | || || ||||| || ||||| | || || || ||| Sbjct 3106083 TCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 3106142 Query 52443 AGCTTTGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500 |||||| | ||||| | | || |||| || | ||||| ||| |||| ||| Sbjct 3106143 TCTTTTGCCTCTATCTTCTGGTTGAAGAAACGT--GGTTTGATGCCTGGCTTGACCTTCT 3106200 Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACT 52557 ||||||| | || || || ||||| || || ||||| |||||||| ||| |||| || Sbjct 3106201 CCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCT 3106260 Query 52558 AC------AAGACGCG-CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTC 52610 | || | || | | || || ||| ||| | | || ||| | |||| Sbjct 3106261 CCCACCTCAACAACCGTCCTAGCCCCAAGATT--ATT-GAAGAC-ATCAT-----TGTT- 3106310 Query 52611 AAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTG 52670 || || || || || ||| | ||||| || || | ||| || || || |||| Sbjct 3106311 ---GACGCCGTTGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTC 3106367 Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 || |||||| || ||| |||||| ||||||||||||| || || || ||||| ||||| Sbjct 3106368 GGAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTT 3106427 Query 52731 CAGCTCG-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACA 52788 |||| |||| | | ||||||| |||||| ||| || ||||| || ||| | |||| Sbjct 3106428 --GCTCTTGGCAACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACA 3106485 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 | || |||| |||||||||||||| ||||||||||| || || || ||| || Sbjct 3106486 TCTCTCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3106538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262027803200