Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq19 113 4e-20 seq17 109 5e-19 seq28 91.5 1e-13 seq27 86.0 6e-12 >seq19 Length=2486755 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||| || | || ||||| || || || |||||||| Sbjct 1821831 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 1821772 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| ||||| || || ||||| | |||||||||||||| ||||| || Sbjct 1821771 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 1821712 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || |||||| ||| | | || | |||||| | |||||| Sbjct 1821711 ATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACT 1821652 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || || ||||||||||| Sbjct 1821651 TCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 96.9 bits (106), Expect = 3e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 126929 TGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAAT 126988 ||||| ||||| || | |||||| || || ||||| || ||||| ||||||| Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 126989 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGAC 127047 |||||||| || ||||| ||||||||||||||| || || ||||| |||| |||| Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG-TCGAT 1820667 Query 127048 GGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 127107 ||| || | | ||| || || | ||| | || || || || || || || || || || Sbjct 1820666 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 1820607 Query 127108 CTGCATG 127114 ||||||| Sbjct 1820606 CTGCATG 1820600 >seq17 Length=3189086 Score = 109 bits (120), Expect = 5e-19 Identities = 295/445 (66%), Gaps = 25/445 (6%) Strand=Plus/Plus Query 47146 TCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACA 47205 |||| ||||| || ||||| |||||||||| ||| ||||| | || || | Sbjct 3106105 TCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGT 3106164 Query 47206 TGAAAACCAAAGGAGTT--ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263 |||| | || | ||| ||||| ||| | || || ||||||||| ||||| | || Sbjct 3106165 TGAAGA--AACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGA 3106222 Query 47264 CGAAGGCCTGCACACCAACTTTGCCTGT---CTCTACTACAACACTAGAGTCGATCAAAA 47320 ||| || || |||||| |||||||||| |||| || | || || | ||| Sbjct 3106223 CGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACC------TCAA-CAACC 3106275 Query 47321 GTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377 || | |||| | | || ||| ||| || ||||| |||||||| || Sbjct 3106276 GTCCTAGC--CCCAAGATTATTGAAGACATCATTGTTGACGCCGTTGCCATTGAACAAGA 3106333 Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437 ||| || |||| ||||| ||| |||| | ||||||||| || || ||||| | | Sbjct 3106334 GTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCA 3106393 Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497 ||||||||| || || || ||||| || | ||| || | ||||| ||| | Sbjct 3106394 GTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAA---CAAGAAGTACTA 3106450 Query 47498 CACCGAGA---ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554 || || | | || || || || ||| | ||||| || || | |||||||||||||| Sbjct 3106451 CAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTT 3106510 Query 47555 TTTCGAGAAGCGCGTCGGCGAATAT 47579 ||||||||||| || || || ||| Sbjct 3106511 CTTCGAGAAGCGTGTTGGTGACTAT 3106535 >seq28 Length=3612999 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| ||| || ||||| ||||| || ||||| Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| ||||| || || |||||||||||| ||| || ||||| | ||| Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||| | |||||| |||| ||| | || ||||| || || || || || ||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 1575472 >seq27 Length=4195530 Score = 86.0 bits (94), Expect = 6e-12 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 147274 TAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGA 147333 ||||| || || |||||||||||||| ||| ||||| || ||| | || || Sbjct 141807 TAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGT 141748 Query 147334 CGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATC 147393 ||| || || || |||| ||||| ||||| ||||| | || |||| Sbjct 141747 CGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATC 141688 Query 147394 AATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGC 147453 || | || || |||||||| || | || ||||||||||| | | ||| || ||| Sbjct 141687 AAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGC 141628 Query 147454 ATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTG 147513 |||| |||||| ||||| ||||| |||| | | |||||| | | | || || | | Sbjct 141627 ATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTA-GGAGCG 141569 Query 147514 GTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTC 147551 || ||||| |||||||| ||||| | |||| | |||| Sbjct 141568 TTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTC 141530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500443374400