Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq17 149 6e-31 seq28 120 3e-22 seq27 95.1 1e-14 >seq17 Length=3189086 Score = 149 bits (164), Expect = 6e-31 Identities = 347/516 (67%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || ||||| || || || ||||| || || || || || || | Sbjct 3106553 CATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGC 3106494 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || ||| | ||| || || |||||||||| | |||||||| ||| || | Sbjct 3106493 AAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 3106434 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGT-TTCGCAAT 132769 || | || | || | ||| || |||||||||||||| || |||| |||| | | Sbjct 3106433 AAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCG-AGT 3106375 Query 132770 TAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | ||| |||| | |||| || || || ||||| | || ||| || ||||| || Sbjct 3106374 TCATTCCGAGCAAAGCGCAG-GGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACG 3106316 Query 132829 GCGTCGGTGACGAT---TTCCCTAA-CGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884 ||||| | ||| ||| ||| | | | | | ||| |||| | || Sbjct 3106315 GCGTCAACAATGATGTCTTCAATAATCTTGGGGCTAGGACGGTTGTTG----AGGTGGGA 3106260 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||| | |||||| ||||||||| || | |||||||| | || || || |||||| Sbjct 3106259 GAAGAGCAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGA 3106200 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| | || ||||| || | ||| || || | ||| ||| ||| Sbjct 3106199 GAAGGTCAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCC 3106140 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 || ||||||| ||||| || || ||||| || || ||||||| | || |||| || Sbjct 3106139 AGAGAAGAAGATACCCTCAACAGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTGGACTC 3106080 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| | |||||||||||| ||||| |||||||| Sbjct 3106079 CTTGTCCGAGATCCAGCGCAGAGCCCAGTCGGCCTT 3106044 >seq28 Length=3612999 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || |||||| | | Sbjct 1575473 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 1575532 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 1575533 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 1575592 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || || | ||||| ||| ||||||||||||||| ||| Sbjct 1575593 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 1575652 Query 38433 G 38433 | Sbjct 1575653 G 1575653 >seq27 Length=4195530 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| ||||||| ||||| | || | ||| || || ||||| || Sbjct 1511950 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 1512009 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| ||||||||||||||| ||||| | || || || ||||| || Sbjct 1512010 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 1512069 Query 38457 CG 38458 || Sbjct 1512070 CG 1512071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172424870400