Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq27 95.1 1e-14 >seq27 Length=4195530 Score = 95.1 bits (104), Expect = 1e-14 Identities = 268/410 (65%), Gaps = 4/410 (1%) Strand=Plus/Minus Query 48263 TTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGG 48322 |||||| ||||| ||| | ||| ||||| || || | | ||| | ||||| || Sbjct 142078 TTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGG 142019 Query 48323 TTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGC 48382 || | || || || | |||| || || || ||||||||||| || | |||||||| Sbjct 142018 CTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGC 141959 Query 48383 AGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGA 48442 || ||||| | ||||| | ||| || |||| ||| ||||| ||||||||||||| Sbjct 141958 GGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCC 141899 Query 48443 AATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATT 48500 || || ||| | | | || | |||| | ||| |||||||| || Sbjct 141898 GATGTAGGAACCAGTGGAACGGATGCGGTGGACATTG--AGACCAATACCACCGGCAGAC 141841 Query 48501 TTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATC 48560 || || || | ||||| || || |||||||| || || || || || || || || Sbjct 141840 TTGGAGATCATTGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTC 141781 Query 48561 ATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTT 48620 || | | || || ||| || | || || || ||| |||| || || || || Sbjct 141780 ATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTG 141721 Query 48621 GGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAAT 48670 ||||| || || | || |||||| || | ||| || ||||| ||||| Sbjct 141720 GGAGACGCGTGTGTGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAAT 141671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108378418400