Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq27 154 3e-32 seq17 95.1 2e-14 >seq27 Length=4195530 Score = 154 bits (170), Expect = 3e-32 Identities = 576/885 (65%), Gaps = 26/885 (3%) Strand=Plus/Minus Query 221756 ATGATCTCTGTACAGAGGTTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACT 221813 || |||||||| ||||||||| | ||| ||| || || |||| || || || || Sbjct 142410 ATAATCTCTGTGCAGAGGTTG--GAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCT 142353 Query 221814 TGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCA 221873 | ||| ||| |||||||||||||| || || |||||||| ||||||| | | Sbjct 142352 TCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGA 142293 Query 221874 GAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTT 221931 | || || |||||| | |||| || | || || | ||| | ||| || ||| Sbjct 142292 GGATGGCGTACCAGAGCT-TCTGAGCCTTGACGGTACGAC-GACCACGACCTTCCCTCTC 142235 Query 221932 TTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACA 221991 | | | || || | ||||| |||||| ||| ||||| | ||| | || || ||| Sbjct 142234 GTACTTCTCG-TACAAAGCAT--CAAACTCTTCGCCGTAGACGTCGGCAAGACC-GGAAG 142179 Query 221992 CCTGGCG-GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGT 222050 ||| | || || | || |||||| | |||| ||| || | |||||||||| | Sbjct 142178 CCTCGTTAGGGCAGAACAATGTCCAGTCTTGGTTGGCTTCTACACGACGCATGAAGAGAT 142119 Query 222051 CCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTT 222110 | ||| |||||| || | || ||||| | || || || || ||||| ||| | Sbjct 142118 CAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCT 142059 Query 222111 TCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAG 222170 | | || || | |||||||||| || | |||||| ||||| || |||| || | | Sbjct 142058 TGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACG 141999 Query 222171 CGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAA 222230 | || || |||||||| || || || || || || | |||||| | | | Sbjct 141998 CACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 141939 Query 222231 GGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC 222290 | | || || || ||||| || ||| ||||| || ||||| | ||| || | Sbjct 141938 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 141879 Query 222291 TCAGGTTACTGGCAGACATG----CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAG 222346 || | | || ||||| || ||||||||||| || |||||||| || || Sbjct 141878 ---GGATGC-GGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACAT 141823 Query 222347 CTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAA 222406 |||||||||| || ||| ||||| || ||| ||||| | || || || || ||| Sbjct 141822 GTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAA 141763 Query 222407 GACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 || | | ||| | | | | || ||||| |||| |||||| |||||||| ||| Sbjct 141762 GAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAG 141703 Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATC 222526 || | |||||||| | ||| ||||| | | || | ||||||| || |||||||| Sbjct 141702 TATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATA 141643 Query 222527 TGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGA--GCTGG 222584 | ||| | |||| ||||| ||||| | || || ||| | | | | Sbjct 141642 CCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCA--ACCTTGCCATTGATTC 141585 Query 222585 AGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA 222629 ||| ||||| || ||| ||||||||||| || ||||| |||| Sbjct 141584 TGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTA-TTGA 141541 >seq17 Length=3189086 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || || || |||||||| ||||| ||||| ||| || || ||||| | | Sbjct 3106096 AGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTA 3106155 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||| | ||| | || ||||| || || ||| ||||||||||| ||| Sbjct 3106156 TCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCT 3106215 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | ||||||||||| |||| || ||||||||| |||||| Sbjct 3106216 CTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCT 3106257 Score = 93.3 bits (102), Expect = 8e-14 Identities = 163/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||| ||||||||||| ||||| Sbjct 3105645 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACTGCCGAAGAGATCGATCTC 3105704 Query 25537 GCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | || || || ||| |||| || ||| | | || || | | ||| || | Sbjct 3105705 TCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTTATCTCG 3105764 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || |||||||| |||||||||||||| || || ||||| || ||| | Sbjct 3105765 CACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTTGAGCGT 3105824 Query 25654 TTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | ||||| ||| | | || || | | || ||||| ||||||||||| Sbjct 3105825 TTCAGTGGTGAAGTTCAGATTCCTGAAGCTCGA-TGCTTCTATGGTTTCCAGAT 3105877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844103366400