Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq42 1068 0.0 seq34 293 6e-75 >seq42 Length=3210 Score = 1068 bits (1184), Expect = 0.0 Identities = 606/615 (99%), Gaps = 0/615 (0%) Strand=Plus/Plus Query 30931 ATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCA 30990 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCA 60 Query 30991 TCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCAGGCGAGAACATCCCGGCCTGAAC 31050 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct 61 TCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAGAACATCCCTGCCTGAAC 120 Query 31051 ATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCTTC 31110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCTTC 180 Query 31111 ATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACGTTGAG 31170 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 181 ATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTGAG 240 Query 31171 AATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAAGC 31230 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAAGC 300 Query 31231 ACCAACGCCTGACTGTCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAG 31290 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAG 360 Query 31291 TTCAtttttctttttttCATAAATAGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTG 31350 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 361 TTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTG 420 Query 31351 TGTTAATGGTTTCTTTTTTGCGCTCATACGTTAAATCTATCACCGCAAGGGATAAATATC 31410 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATATC 480 Query 31411 TAACACCGTGCGTGTTGACTATTTTACCTCTAGCGGTGATAATGGTTGCATGTACTAAGG 31470 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 481 TAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAAGG 540 Query 31471 AGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAA 31530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAA 600 Query 31531 GACAGCTAAAGATCT 31545 ||||||||||||||| Sbjct 601 GACAGCTAAAGATCT 615 >seq34 Length=3934 Score = 293 bits (324), Expect = 6e-75 Identities = 233/283 (82%), Gaps = 7/283 (2%) Strand=Plus/Plus Query 28884 TCACCGCCCTGGTGAGTAGTGCGTCCTGCTGATGTGTTTAGTATCACCGCCAGTGGTATT 28943 ||||| | ||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct 3517 TCACCTTCATGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATT 3576 Query 28944 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTNNNNNNNN 29003 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3577 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATA 3636 Query 29004 NNNNNNNNNNNNNNNGCAGGGGTGTG-TGGCTTGGGAGGTGATCGAGAGATCTGAATTGC 29062 ||||||| | | | |||| |||||| |||||||||||||| Sbjct 3637 TGAATTTATTTTTT-GCAGGGGGGGCATTGTTTGGTAGGTGA----GAGATCTGAATTGC 3691 Query 29063 GATGTTTAGTGAGTTGTATCTATTAATTTTCAAATAAATACAATTGGTTATGTGTTTT-G 29121 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct 3692 TATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGG 3751 Query 29122 GGGCGAACGTGAGGCAAAGAAAACCCGGCGCGGTGGCCGGGTT 29164 |||||| |||||||||||||||||||||||| | ||||||||| Sbjct 3752 GGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132575905539600