Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq44 125 2e-23 seq27 122 3e-22 seq11 93.3 1e-13 seq17 87.8 5e-12 >seq44 Length=2643372 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||||||||||||||| ||| | || || || || |||||||| ||||| ||||||| Sbjct 996143 ACGCTGAATATAACCCGTTTCGGCAGTCTTGACTGCGGTATCAATAAGACCTTCACGACC 996084 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAAC 302714 | |||||||||| ||||| | |||| ||| || || | || |||| ||||||| Sbjct 996083 AGCCATAGCATGAAAGAAGAACTCTGTTGGTGTAAGACCACGAAGGTAGGAATTCTCAAC 996024 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 ||| || | || ||| || |||| |||| ||||||||| || || || || | || | Sbjct 996023 GAATCCTCTCGACTCCGGAGAATAGTCGTCCTTGGTAAAATGAGGAAGCGTGCGGTATTT 995964 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 |||| | || ||||||||||| || || ||| ||||| Sbjct 995963 GAAGCCAAAGGGAATACGCTTTCCTTCGACAGACTGTTGTCC 995922 Score = 98.7 bits (108), Expect = 3e-15 Identities = 102/132 (77%), Gaps = 4/132 (3%) Strand=Plus/Minus Query 301821 TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAA 301880 ||||| ||| ||||||||| | || ||||| |||||| |||||| ||||||||||| Sbjct 996931 TTCAA-ACGAGGAACACCAAGAGTAACGTT---CTTGGAACTAACACCGGCAAAGTGGAA 996876 Query 301881 AGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAAC 301940 |||||||| ||| | || |||| ||||| || ||| ||| || || | | ||| || Sbjct 996875 AGTATTCAAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGAC 996816 Query 301941 CATTTCTCCTGG 301952 |||||||||||| Sbjct 996815 CATTTCTCCTGG 996804 >seq27 Length=4195530 Score = 122 bits (134), Expect = 3e-22 Identities = 404/625 (65%), Gaps = 5/625 (1%) Strand=Plus/Minus Query 155909 TACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA 155968 |||||| ||| || | |||| | ||| | |||||||| || || | || || Sbjct 142138 TACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACG-GA 142080 Query 155969 CTCCT-CATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTG 156027 || || | | |||||| ||||| || || || | ||| || || ||| | || | Sbjct 142079 CTTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGG 142020 Query 156028 GCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAG 156084 |||| || || |||||||| |||| | |||| || || || || || || | | Sbjct 142019 GCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGG 141960 Query 156085 CAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGC 156144 | || || ||||| || | |||||||| | || ||| || ||||| ||||||||||| | Sbjct 141959 CGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTC 141900 Query 156145 GAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATT 156204 || | ||||||| || || | || | || || ||||||||||| | | | Sbjct 141899 CGATGTAGGAACCAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACT 141840 Query 156205 TAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA 156264 | || || || ||| ||| | ||||| | ||||| ||||| || || | || Sbjct 141839 TGGAGATCATTGCACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCA 141780 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 | | || |||| ||| | || ||||| || || || |||||||| | || | Sbjct 141779 TGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGG 141720 Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384 | | || || | || || || | |||||| | | ||||||||| | ||||| | Sbjct 141719 GAGACGCGTGTGTGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGA 141660 Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444 || |||||||||| | | || | ||| ||| || || ||||| || ||| Sbjct 141659 TGTTCTCGCCGTGAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAA 141600 Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAA 156504 | |||| |||| || ||||| | |||||| ||||| || || ||||| || | | Sbjct 141599 CCTTGCCATTGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGAT 141540 Query 156505 ACAGAAAATCACGGTTGTAATCAAT 156529 | || ||||||| ||| |||| Sbjct 141539 AGTTGAAGTCACGGTCATAAACAAT 141515 >seq11 Length=577942 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/229 (70%), Gaps = 14/229 (6%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||| |||||||| || |||||||| ||||||||||| ||| Sbjct 306638 GCACCGTGCGCAATCATACAATCGCGCTCCATCTCTCCGAAACGTAGACCACCATCACGA 306579 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | ||| || ||||||| | || | | ||||||| | ||||| Sbjct 306578 GCACGACCTTCTACAGGCTGTCTGGTCAAGATCTGGGTAGGACCACGTGCACGAGCG--- 306522 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 || |||||| | ||||| || |||||||||||| ||| ||||| | ||||| Sbjct 306521 -TGAATCTTATCGTCGACCATGTGTCGTAGACGCTGGTAGTATGTAGGACCCAAGAAGA- 306464 Query 251661 GCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACTTCG 251706 | || | || || ||| || || || |||| ||||| |||||| Sbjct 306463 --CCTGAGCCTTTAGCTTCTTACCGGTATGACCGTTGTACATCACTTCG 306417 >seq17 Length=3189086 Score = 87.8 bits (96), Expect = 5e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 |||| || ||| ||||| | ||||||||| | |||||| ||||||| | | Sbjct 3106027 TTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCA 3106086 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| || || || || || |||| || ||||| || || ||| ||| | | Sbjct 3106087 CCTTTGCTCAGCGCCTTGTCGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCTT 3106146 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 | |||||| || ||| | || || |||||| | | ||||| || || || |||| Sbjct 3106147 TTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3106206 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || | ||||||| ||||||||||| |||||| Sbjct 3106207 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCC 3106247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816468540220