Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq17 127 3e-23 seq27 98.7 1e-14 >seq17 Length=3189086 Score = 127 bits (140), Expect = 3e-23 Identities = 219/312 (70%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 1455762 TCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCC 1455821 ||| |||| | | ||| ||| |||||||| || |||||||| |||||||| ||||| ||| Sbjct 3105632 TCCTCTACAA-CAGATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCCTTCTGGACTGCC 3105689 Query 1455822 GAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAG 1455878 || ||| |||| ||| || | | ||||| || |||| |||||| || Sbjct 3105690 GAAGAGATCGATCTCTCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAA 3105749 Query 1455879 CGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGA 1455938 ||| | || ||| ||||||||||||||| ||| || ||| ||||| ||||| || Sbjct 3105750 CGCTACTTTATCTCGCACGTCCTCGCCTTCTTT-GCTGCCTCTGATGGTATCGTCAATGA 3105808 Query 1455939 GAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGG 1455998 |||| ||| | || || | || || || | || || || || | || || || Sbjct 3105809 GAACTTGGTTGAGCGTTTCAGTGGTGAAGTTCAGATTCCTGAAGCTCGATGCTTCTATGG 3105868 Query 1455999 GTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTA 1456058 ||||||||| || || ||||| ||||| || || ||||| ||||| || |||||||| Sbjct 3105869 TTTCCAGATCATGATGGAGAACATTCACTCCGAGACATACTCTCTCCTCATTGACACCTA 3105928 Query 1456059 CGTCAAGGACCC 1456070 | |||| || || Sbjct 3105929 CATCAACGAACC 3105940 >seq27 Length=4195530 Score = 98.7 bits (108), Expect = 1e-14 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| | | ||||| ||| | ||||| | || || || || || || || Sbjct 141689 ATGTCTCAGAAATACTTCACACACGCGTCTCCCACTTTGTTCAACGCAGGTACTCCTCGA 141748 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || ||| | | || ||||| || |||||||||||| || || ||||| |||||| Sbjct 141749 CCACAGCTTGCTTCTTGCTTCCTTGTGGACATGAAGGAAGACAGCATTGAGGGTATCTAT 141808 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 || || |||||| || || | ||||||||| | ||||| || || ||| | | Sbjct 141809 GATACTCTCAAGACATGTGCAATGATCTCCAAGTCTGCCGGTGGTATTGGTCTCAATGTC 141868 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | || || | || ||||| | | || ||||| || || ||||| ||| Sbjct 141869 CACCGCATCCGTTCCACTGGTTCCTACATCGGAGGAACCAATGGTACTTCAAACGGTCTT 141928 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 ||||| ||||| | || || ||| |||| || | ||||||||||| Sbjct 141929 GTGCCTATGCTCAGAGTGTTCAACAACACCGCCAGATACGTCGACCA 141975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805412889720