Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq42 1101 0.0 seq34 820 0.0 >seq42 Length=3210 Score = 1101 bits (1220), Expect = 0.0 Identities = 613/615 (99%), Gaps = 0/615 (0%) Strand=Plus/Plus Query 30050 ATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCA 30109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCA 60 Query 30110 TCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCAGGTGAGAACATCCCTGCCTGAAC 30169 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 TCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAGAACATCCCTGCCTGAAC 120 Query 30170 ATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCTTC 30229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCTTC 180 Query 30230 ATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTGAG 30289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTGAG 240 Query 30290 AATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAAGC 30349 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAAGC 300 Query 30350 ACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAG 30409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAG 360 Query 30410 TTCAtttttctttttttCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTG 30469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTG 420 Query 30470 TGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATATC 30529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATATC 480 Query 30530 TAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAAGG 30589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAAGG 540 Query 30590 AGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAA 30649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGGTTGTATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAA 600 Query 30650 GACAGCTAAAGATCT 30664 ||||||||||||||| Sbjct 601 GACAGCTAAAGATCT 615 Score = 558 bits (618), Expect = 9e-155 Identities = 337/361 (93%), Gaps = 1/361 (0%) Strand=Plus/Plus Query 31370 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 31429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 669 Query 31430 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 31489 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 670 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 729 Query 31490 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 31549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 789 Query 31550 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 31609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 849 Query 31610 NNNNNNNNNNNNNNNNNNNNNAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 31669 ||||||||||||||||||||||||||||||||||||||| Sbjct 850 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 909 Query 31670 GGGGGACACAAAAGACACTATTACaaaagaaaaaagaaaaGATTATTCGTCCGAGAATTC 31729 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 910 GGGGGACACAAAAGACACTATTACAAAAG-AAAAAGAAAAGATTATTCGTCAGAGAATTC 968 Query 31730 T 31730 | Sbjct 969 T 969 >seq34 Length=3934 Score = 820 bits (908), Expect = 0.0 Identities = 467/473 (99%), Gaps = 3/473 (1%) Strand=Plus/Plus Query 28052 CAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTAAATTTTTAAGAGCCTCACCT 28111 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 3463 CAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGCGTCACCT 3522 Query 28112 TCAATGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCTAGTGGTATTTATGT 28171 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3523 TCA-TGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATTTATGT 3581 Query 28172 CAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGttttttatatgaat 28231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3582 CAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATATGAAT 3641 Query 28232 ttattttttGCAGGGG--GCATTGTTTGGTAGGTGAGAGATCTGAATTGCTATGTTTAGT 28289 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3642 TTATTTTTTGCAGGGGGGGCATTGTTTGGTAGGTGAGAGATCTGAATTGCTATGTTTAGT 3701 Query 28290 GAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGGGGGCGATCGT 28349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3702 GAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGGGGGCGATCGT 3761 Query 28350 GAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTTATTCTTGTTCTCTGGTCAAATTATATA 28409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3762 GAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTTATTCTTGTTCTCTGGTCAAATTATATA 3821 Query 28410 GTTGGAAAACAAGGATGCATATATGAATGAACGATGCAGAGGCAATGCCGATGGCGATAG 28469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3822 GTTGGAAAACAAGGATGCATATATGAATGAACGATGCAGAGGCAATGCCGATGGCGATAG 3881 Query 28470 TGGGTATCATGTAGCCGCTTATGCTGGAAAGAAGCAATAACCCGCAGAAAAAC 28522 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3882 TGGGTATCATGTAGCCGCTTATGCTGGAAAGAAGCAATAACCCGCAGAAAAAC 3934 Score = 488 bits (540), Expect = 1e-133 Identities = 278/283 (98%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 27708 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATC 27767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3071 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATC 3130 Query 27768 TGTTCGTGGTATTCAGCCAGCACCGTAAGGTCTATCGGATTCAGTGCGCTTTCTACTCGT 27827 |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 3131 TGTTTGTGGTATTCAGCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGT 3190 Query 27828 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCAGTTAACTGGTTTTGCGCTTACCCCA 27887 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3191 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCA 3250 Query 27888 ACCAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 27947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3251 ACCAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 3310 Query 27948 CGTGCTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTG 27990 |||| |||||||||||||||||||||||||||||||||||||| Sbjct 3311 CGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTG 3353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122723112559720