Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq27 172 7e-38 seq17 111 2e-19 >seq27 Length=4195530 Score = 172 bits (190), Expect = 7e-38 Identities = 561/862 (65%), Gaps = 27/862 (3%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 ||||| || | || ||||||||||| ||||| |||||| | | ||| || | | Sbjct 142467 GGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATA 142408 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || ||||| || | ||||||||| || || || | ||||||||||| ||||||||| Sbjct 142407 ATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTG 142348 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| | || | || ||||| ||||| | | ||| || Sbjct 142347 TTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATG 142288 Query 111410 GCCTTCCA-AACATCGGCGGCT----GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGT 111464 || | ||| | | || | | || ||||| | | | | || || ||| ||||| Sbjct 142287 GCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGAC-----CACGACCTTCCCTCTCGT 142233 Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524 |||| ||| | || |||||||| || || |||||| ||||| | |||| || Sbjct 142232 ACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGT 142173 Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGG 111582 || ||||| | | ||| | | || | || || || |||||| || || || Sbjct 142172 TAGGGCAGAACAATGTCCA--GTCTTGGTTGGCTTCTACACGACGCATGAAGAGATCAGG 142115 Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 |||||| || | || ||||| | ||| || | ||||| | || ||||| | Sbjct 142114 GGTCCACAAGGCATAGAACAGATCACGGGCACGGA-CTTCTTCTTTGCCGTGGTTCTTGC 142056 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------ 111695 | | ||||||||||| | | ||||| |||||| ||||| || |||| || | Sbjct 142055 GAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCAC 141996 Query 111696 TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 || | ||| | || |||| | || || | || ||| ||| || || | | Sbjct 141995 CAGGGCGCTTGTTA---CCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGA 141939 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815 |||| || | || ||| | ||| |||||| || || | || || | ||| | Sbjct 141938 GCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC 141879 Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875 | |||| | | |||||||| || || |||| ||||| ||||| | Sbjct 141878 GGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 141819 Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935 | ||||| |||||||||| | || ||| ||||| || | | |||||||||| | Sbjct 141818 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 141759 Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATA 111994 | ||| |||| || ||||| || ||||| | || || | ||||| |||| || Sbjct 141758 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 141699 Query 111995 CCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 112054 | || |||||| || ||||||||| | | | || |||| || ||||| || || Sbjct 141698 TC-TGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCA 141640 Query 112055 ATTGCGACCCGCATGAACATGT 112076 | || || ||||||| ||||| Sbjct 141639 ACGGCAACACGCATGATCATGT 141618 >seq17 Length=3189086 Score = 111 bits (122), Expect = 2e-19 Identities = 298/455 (65%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429 |||||| || || |||||||| |||||||||||||| || |||| ||||| ||||| Sbjct 3106535 ATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCCAT 3106476 Query 122430 AAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAG 122483 |||||||| || || | ||||| | | | || || |||| | Sbjct 3106475 GAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCAACC------AA 3106422 Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543 |||||| || | || |||| ||||||| | ||||| || |||||||| |||| | Sbjct 3106421 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3106362 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 || || || ||||| | |||| ||| ||||| |||| || || | ||| Sbjct 3106361 AGCGCAGGGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACGGCGTCAACAATGAT 3106302 Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 122663 | | | ||| | | || | || | || | ||||||| |||||| Sbjct 3106301 GTCTTCAATAATCTTGGGGCTAGGACGGTTGTTGAGGTGGGAGAAGAGCAAGCAGGCAAA 3106242 Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723 || ||| |||||||| || || || ||||| || || |||||| | || ||||| Sbjct 3106241 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3106182 Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 | ||| || ||||||||||| | |||| | || || || ||||||||||||||||| Sbjct 3106181 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3106122 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||| || || || | |||||| | || |||| Sbjct 3106121 AACAGCAGCGAATGCGACAAGGCGCTGAGCAAAGG 3106087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031528976000