Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq22 197 4e-45 seq19 132 1e-25 seq28 86.0 2e-11 seq44 84.2 7e-11 >seq22 Length=1358518 Score = 197 bits (218), Expect = 4e-45 Identities = 484/731 (66%), Gaps = 11/731 (2%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||||| || |||||||| || || || || || || || | ||| | | |||| | Sbjct 1021209 CCGCTATCGGTATCGATTTGGGAACCACCTACTCCTGCGTGGGTGTCTTCCGTGATGACC 1021268 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | ||||| ||||| || || || |||||| |||| || || || | |||||| || | Sbjct 1021269 GTATCGAAATTATTGCCAACGACCAGGGTAACCGAACCACCCCCTCGTTCGTTGCCTTCA 1021328 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| | |||||| | || |||||| |||| || || || | || || || | | Sbjct 1021329 CCGACTCCGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCTCACA 1021388 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || || || ||||| | || || | | || || ||| | || Sbjct 1021389 ACACAGTCTTCGACGCGAAGCGTTTGATCGGCCGCAAGTTCTCCGACCCTGAGGTC---- 1021444 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| || || || || || | | || | | ||| | | | || | Sbjct 1021445 CAGGCTGATGCCAAGCACTTCCCCTTCAAGATCGT-CGACAAGGCCACCA--AGCCCGTC 1021501 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||||||| | || ||||| || || || || || ||||| || || ||| Sbjct 1021502 ATCGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACCCCTGAGGAAATCTCTTCCATG 1021561 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || || | || ||| || | |||||| | || | |||| || || | | ||| Sbjct 1021562 GTCTTGATCAAGATGCGTGAGACTGCTGAGTCTTACCTCGGTGGTACCGTCAACAACGCT 1021621 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || || || || ||||| || || || |||||||| || || || |||||||| Sbjct 1021622 GTCATCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCTGGT 1021681 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || || || || || | || ||||| || || |||||||| || ||||| Sbjct 1021682 CTCATTGCCGGTTTGAACGTCCTCCGTATCATTAACGAGCCTACTGCTGCTGCCATTGCC 1021741 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | ||| || || | || || || ||| |||||||| Sbjct 1021742 TACGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAACGTCCTCATCTTCGATCTAGGTGGT 1021801 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 1021802 GGTACCTTCGATGTCTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 1021861 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || | ||||| || ||||| ||| |||||||||| ||||| || Sbjct 1021862 GCCGGTGACACTCACTTGGGTGGTGAGGATTTCGATTCTCGTCTCGTTAATCATTTCGTA 1021921 Query 349913 AAAGAATTTAA 349923 || || || || Sbjct 1021922 AACGAGTTCAA 1021932 >seq19 Length=2486755 Score = 132 bits (146), Expect = 1e-25 Identities = 157/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || ||||| || || || || |||||||| | || || |||||||| | Sbjct 1821811 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTA 1821753 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || |||||||| || | || ||||| || || || || || || ||||| || | Sbjct 1821752 GTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGA 1821693 Query 140650 TTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 |||| ||| || ||||| ||||| | || || | ||| ||||| | ||| | |||||| Sbjct 1821692 TTTT-GCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTT 1821634 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | || || || ||||||||||| Sbjct 1821633 CCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 118 bits (130), Expect = 3e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612 ||||| || || ||||| | || || || ||||| || || || ||||||||||| | | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||| ||||||||||| || || || |||||||| || | || || || || || Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | |||||| | || || ||||| || | ||||| || || || || || || || ||| Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 140733 TGCAT 140737 ||||| Sbjct 1820605 TGCAT 1820601 Score = 100 bits (110), Expect = 9e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 140580 CCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCT 140639 || || || || || |||||||| ||||| | ||| ||||| |||||||| || || || Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 140640 TTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699 ||||||||||| || | || || || || || | ||||| | || || ||||| || Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 140700 ACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| ||||| || || || ||||| || ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 86.0 bits (94), Expect = 2e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || ||||||||||| || ||||| |||||||| Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| ||||| || || || || || || || ||||| || || | || ||||| || Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | || || | || || || || || | ||||| || || || || || || ||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 1575472 >seq44 Length=2643372 Score = 84.2 bits (92), Expect = 7e-11 Identities = 95/127 (75%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | ||||| ||| || || |||||| ||||||||||||||||| Sbjct 996925 CGAGGAACACCAAGAGTAACGTTC---TTGGAACTAACACCGGCAAAGTGGAAAGTATTC 996869 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | ||| | || |||| ||||| || || || || || || | ||| || ||||||||| Sbjct 996868 AAAGTCATCTGTGTAGCAGGCTCTCCGATAGATTGGGCGGCTAGAACACCGACCATTTCT 996809 Query 377578 CCAGGAT 377584 || |||| Sbjct 996808 CCTGGAT 996802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253235148180