Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq27 206 3e-48 seq17 89.7 6e-13 >seq27 Length=4195530 Score = 206 bits (228), Expect = 3e-48 Identities = 506/759 (67%), Gaps = 16/759 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| ||||| || || | | | | |||||| ||| Sbjct 141624 TCATGCGTGTTGCCGTTGGTATTCACGGCGAGAACATCGAGAAAGCCATTGAGACATACA 141683 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| || || ||||| || ||||| | || || |||||||||| ||||| Sbjct 141684 ACTTGATGTCTCAGAAATACTTCACACACGCGTCTCCCACTTTGTTCAACGCAGGTACTC 141743 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || || ||| | | |||||||| |||| |||||||| ||| || || || | Sbjct 141744 CTCGACCACAGCTTGCTTCTTGCTTCCTTGTGGACATGAAGGAAGACAGCATTGAGGGTA 141803 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 |||| || || |||||| ||||| |||||||||| | |||||||| ||| || Sbjct 141804 TCTATGATACTCTCAAGACATGTGCAATGATCTCCAAGTCTGCCGGTGGTATTGGTCTCA 141863 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || || | || ||||| | | || | ||| || || || || | | Sbjct 141864 A-TG-TCCACCGCATCCGTTCCACTGGTTCCTACATCGGAGGAACCAATGGTACTTCAAA 141921 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | |||||||||||| | || ||||||||||| ||| | |||||| |||| || || Sbjct 141922 CGGTCTTGTGCCTATGCTCAGAGTGTTCAACAACACCGCCAGATACGTCGACCAAGGAGG 141981 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | |||||| || |||| || |||||||||||||| |||||| | || || | || Sbjct 141982 TAACAAGCGCCCTGGTGCGTTTGCTATCTACCTCGAGCCCTGGCACTCGGATGTTTTTGA 142041 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| || || || || ||| || || | ||||| | || |||||| ||||| Sbjct 142042 GTTCCTTGACCTTCGCAAGAACCACGGCAAAGAAGAAGTCCGTGCCCGTGATCTGTTCTA 142101 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG--GACGAGGAGTGGTAC 53728 || |||||| || || |||||||||| ||| ||||| || | || ||| Sbjct 142102 TGCCTTGTGGACCCCTGATCTCTTCATGC--GTCGTGTAGAAGCCAACCAAGACTGGACA 142159 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 || | ||||| |||||| |||| || | |||||||| || |||||| | | Sbjct 142160 TTGTTCTGCCCTAACGAGGCTTCCGGTCTTGCCGACGTCTACGGCGAAGAGTTTGATGCT 142219 Query 53789 ATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAG----AAGGTCAAGGCGCGTGA 53844 |||| || ||||| || |||| | | | | | |||||||| | | Sbjct 142220 TTGTACGAGAAGTACG-AG---AGGGAAGGTCGTGGTCGTCGTACCGTCAAGGCTCAGAA 142275 Query 53845 GGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAA 53904 | | ||| | || |||||| || ||| ||||| || | |||| |||| |||||| Sbjct 142276 GCTCTGGTACGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCGTTCATGCTCTACAA 142335 Query 53905 GGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||| | |||| ||||||||||||| |||||| |||| Sbjct 142336 GGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTCGG 142374 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 55689 ACGGGGGGTCCGTCCAGA--ATCTGGAGATTCCTCTGC-GTC-TCAAGGAGATTTACCGG 55744 |||| || |||||||||| ||| | ||| |||| | | |||||| | ||| | Sbjct 143100 ACGGCGGATCCGTCCAGAACATCCCCAACATCC-CTGCTGACATCAAGGCTCTCTACAAG 143158 Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTC--TGATTGACATGAGTGCTGATCGTGGTGCGT 55802 || || |||||||| | ||| || || | || | ||| |||||| |||||||| | Sbjct 143159 ACTGTCTGGGAGATCTCTCAG-CGA-TCGATCCTTCAGATGGCTGCTGACCGTGGTGCTT 143216 Query 55803 ACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 |||| |||||||| || || || || ||| |||| || | || | ||| |||| | | Sbjct 143217 ACATTGACCAGTCTCAATCCCTCAATATCCACATGAAGGAACCCACTATGGGCAAGATCA 143276 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 | ||||||||| || ||||||| |||| | ||||| || |||||||| |||| | Sbjct 143277 CCAGTATGCACTTTGCTGGTTGGAAGATGGGATTGAAGACTGGAATGTACTACTTGCGTA 143336 Query 55923 C 55923 | Sbjct 143337 C 143337 >seq17 Length=3189086 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 119000 ACCTTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTT---CTTAC---CATCACTA 119053 ||||||||||| ||||| ||||| | ||||| || | || || || |||| Sbjct 1360491 ACCTTGCTCATATTGTCCGTCCATGTTTGCACATATTTTTTGCCCTGACGAGAATCAACG 1360550 Query 119054 ATTTTGATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGA 119113 | | |||| |||||| || | ||| ||||| |||||| |||||| | ||||| ||| Sbjct 1360551 GTCTCGATGCTAAATTCCGTAGAGAAGACGTTACATAGCTTAGCACCGAAACCGTTACGA 1360610 Query 119114 CCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAG 119173 ||||| || || | || | || | |||||| ||| ||||| |||||| ||||| Sbjct 1360611 CCACCCGTTACCTTCATCTGTCCATCATCGTAGTTCGAGGAGGTCAGAAGGTGGCCAAAA 1360670 Query 119174 ATGAGCTCggg 119184 |||||||| || Sbjct 1360671 ATGAGCTCAGG 1360681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215589588000