Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq19 152 6e-32 seq28 120 3e-22 seq27 107 2e-18 >seq19 Length=2486755 Score = 152 bits (168), Expect = 6e-32 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || || ||||| || || |||||||| ||||| Sbjct 1820598 ATCATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCT 1820657 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||| | || | ||| | || ||||||||||||||||| |||||||| ||| Sbjct 1820658 TCTGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGAC 1820717 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || |||||||| ||||| ||||| || | ||| ||||| | ||||| Sbjct 1820718 CAGCAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTAC 1820777 Query 27583 AA 27584 || Sbjct 1820778 AA 1820779 Score = 149 bits (164), Expect = 7e-31 Identities = 126/155 (81%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| | Sbjct 1820885 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 1820944 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || |||||||| |||||||| || ||||| |||||| Sbjct 1820945 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 1821004 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 |||||| | || || ||||| ||||| |||||||| Sbjct 1821005 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGA 1821039 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| |||||||| || | || || || || Sbjct 1821605 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 1821664 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| ||||| || || |||||||| || || || |||||| Sbjct 1821665 GACACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 1821724 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | |||||||||||||||||||| || |||| ||| || || | || || || Sbjct 1821725 CAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAAC 1821784 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | || | ||||| |||||||| Sbjct 1821785 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 1821831 >seq28 Length=3612999 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 1575473 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 1575532 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || |||||||||||||| Sbjct 1575533 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 1575592 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||| || ||||| || || |||| || || || | ||||| || |||| ||| Sbjct 1575593 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 1575652 Query 27595 G 27595 | Sbjct 1575653 G 1575653 >seq27 Length=4195530 Score = 107 bits (118), Expect = 2e-18 Identities = 768/1228 (63%), Gaps = 27/1228 (2%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| |||||||| |||| || | ||||| ||| || | |||||||| | Sbjct 142829 CCCACATGTCGTATTGCAAGATACCCTGGGAGACAGGAGAGCCCTCGTAGGTCTCGTAAG 142770 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 ||| | | |||||| || || || | | | ||| |||| || || ||||| Sbjct 142769 TGCCGTACTCCTTGGCAAGTTCGACGGAGGCAGTCAAGGCACCGTGGTAGATTGTCTCAA 142710 Query 80660 AGACGCCCTTGTTCACACCGCGCG-CCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718 | | |||||| | || | ||| || ||| || | | || | | | Sbjct 142709 AAATCTGGATGTTCA-ATTGCTTGGCCTCCGGAGAGTCAAAAGGAAGGCGGAGAGCAAGG 142651 Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG- 80777 || | ||||| || || | || || | || || || ||||| || ||| | || Sbjct 142650 AAAGCATCAGCAAGACCATTCACACCAACTGCAATAGGACGGTGACGGAAGTT-GCTCTT 142592 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 || |||||| || | ||||| |||| | ||||||| ||| |||||||| || Sbjct 142591 CTTGGCCTCAGGCACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTGCGCACAAG 142532 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TCA-CA 80889 ||| | || || || || | ||| |||||| | | | || | ||| || Sbjct 142531 CACCTGGGTGACTTCGTGCAATTTACCAAAGTCATACTCG--CCACGAGCGGTATCAACA 142474 Query 80890 AATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949 || | ||||| ||||| |||| |||||| || || ||||| |||| | | | Sbjct 142473 AAGGTAGGAAGAGCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTAT 142414 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || | || || ||||| | || ||| || ||||| ||||| || ||||| | Sbjct 142413 TCAATAATCTCTGTGCAGAGGTTGGAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTC 142354 Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069 || ||||||||| ||||||||| |||| ||||| |||| ||||| ||| | || | Sbjct 142353 TTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCG 142294 Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGAC--CACCTTGCGGAATTTG-CCTTCGGCC 81126 |||||||||| ||| | || | |||||||| || | || | ||||| | Sbjct 142293 AGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTAC---GACGACCACGACCTTCCCTC 142237 Query 81127 ACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC 81186 | ||||| |||| | || |||| | |||| | || | || | | | Sbjct 142236 TCGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCC 142177 Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246 ||||||||||| | || |||||| || | |||||| |||||| ||| Sbjct 142176 TCGTTAGGGCAGAACAATGTCCAGTCTTGGTTGGCTTCTACACGACGCATGAAGAGATCA 142117 Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 ||| |||| | ||| |||||| || ||| || | || || | || ||||| | Sbjct 142116 GGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTG 142057 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 || | || || || || | | |||| ||||| ||||| || || | || | || Sbjct 142056 CGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCA 141997 Query 81367 CCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||| | || || |||| |||||| | ||| || ||| || || | | | Sbjct 141996 CCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGC 141937 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 ||||| | | ||| | ||| ||| || || || |||| || || ||| || Sbjct 141936 ATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGG 141877 Query 81484 A--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGT 81541 | | || |||| ||||| || ||||| | |||| || ||| ||||| | Sbjct 141876 ATGCGGTGGACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCT 141819 Query 81542 TCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTG 81601 | | || ||||| || ||||| ||||| |||| |||||||| | | ||| || | Sbjct 141818 TGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAG 141759 Query 81602 ACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 | ||| || | | || || ||||||| || || | |||||| |||| || Sbjct 141758 CAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATT 141699 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | ||||||| || || || || || | || | || ||||||||||| | Sbjct 141698 TCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAA 141639 Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749 || |||||||| | ||||| ||||| Sbjct 141638 CGGCAACACGCATGATCATGTGTTGGGG 141611 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||| | || || || || ||||| ||||| Sbjct 1511950 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 1512009 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| ||||||||||| | ||| | Sbjct 1512010 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 1512069 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 1512070 CGCCTCCGTGGTGG 1512083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309972267200