Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq17 87.8 2e-12 >seq17 Length=3189086 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 34646 TATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTG 34705 |||||||||||| | || ||||| | ||||| |||||||| || |||||||| || || Sbjct 1322688 TATCAACGATCGTGCGATATGGGTCTCGGGGTACCGTTCAATATAGCTAGTTATGCGCTA 1322747 Query 34706 CTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGGTGCATACGTT 34764 || ||| | ||| | |||||||| ||| ||| | || || || || |||| | Sbjct 1322748 CTTACGCATATGCTGGCTCATGT-GTGTGGTCTTGTCCCCGGCAGTCTTACGCATGTCAT 1322806 Query 34765 GGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGA 34824 ||| |||||||| | ||||| | || |||| ||| | | || || |||| || Sbjct 1322807 GGGAGATGCGCACGTTTACCTTGATCATGTCGATGCTCTCAAGGTACAATTGGAACGTGA 1322866 Query 34825 GCCCCGACCGTTCCCCCAGCTCAAAAT 34851 || ||||| ||||| |||| |||| Sbjct 1322867 ACCACGACCATTCCCAGAGCTAGAAAT 1322893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553 |||| |||| ||||| ||||| || || |||| || || | | ||| |||| Sbjct 1322893 ATTTCTAGCTCTGGGAATGGTCGTGGTTCACGTTCCAATTGTACCTTGAGAGCATCGACA 1322834 Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCA-ACCC 6612 || | ||||| | |||||||| |||| |||| || || || || | ||| Sbjct 1322833 TGATCAAGGTAAACGTGCGCATCTCCCATGACATGCGTAAGACTGCCGGGGACAAGACCA 1322774 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCC 6672 ||| |||||||| | ||| | ||| || || || |||||||| || |||||||| ||||| Sbjct 1322773 CAC-ACATGAGCCAGCATATGCGTAAGTAGCGCATAACTAGCTATATTGAACGGTACCCC 1322715 Query 6673 TAACCCCATGTCTCCCGATCGTTGATA 6699 | ||||| || | |||||||||||| Sbjct 1322714 GAGACCCATATCGCACGATCGTTGATA 1322688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262063803200