Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq19 140 8e-28 seq28 134 3e-26 seq27 95.1 3e-14 >seq19 Length=2486755 Score = 140 bits (154), Expect = 8e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989 || ||||| || || | |||||| | || ||||| ||||||||||| || ||||| | Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || || ||||||||||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 || ||||| || ||||| || ||||| ||||| || ||||| ||||| || || | | Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 211110 TGCAT 211114 ||||| Sbjct 1820605 TGCAT 1820601 Score = 123 bits (136), Expect = 6e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || |||||||| || |||||||| | || || ||||||||||| | || ||| Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| ||||| || ||||| ||||||||||||||| || ||||| || ||| Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| ||||| | ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | |||||||| |||||||| || || ||||| Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || || || ||| Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1575473 >seq27 Length=4195530 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| || || | ||||| | || ||| Sbjct 1512068 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 1512009 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || || | || ||||||| | Sbjct 1512008 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGT-C 1511950 Query 211023 TGGA 211026 |||| Sbjct 1511949 TGGA 1511946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151108901900