Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq19 102 6e-17 seq28 89.7 3e-13 >seq19 Length=2486755 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || ||||| || ||||| | ||||| || || | Sbjct 1821605 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 1821664 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | ||||| || || || ||| | || || || || Sbjct 1821665 GACACCATTGACAATGTGAAGA-GCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCA 1821723 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || ||||| || || ||||| ||||| | |||||| | |||||||| Sbjct 1821724 GCAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAA 1821783 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 1821784 CATCCAGAAGGAGTCCAC 1821801 >seq28 Length=3612999 Score = 89.7 bits (98), Expect = 3e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| || ||||||||||| || || ||||| ||||| || || ||| | ||||| | Sbjct 1575472 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 1575531 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 || ||| | || | || || ||||| || ||| | || || || || |||||| Sbjct 1575532 CGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTC 1575590 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 | || |||||||| || || || ||||| | |||||| | ||| |||||||| || | Sbjct 1575591 TGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGA 1575650 Query 23798 A 23798 | Sbjct 1575651 A 1575651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009352830480