Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015-
01-16] 60 sequences; 36,402,801 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq19 143 6e-29
seq28 125 2e-23
seq27 86.0 1e-11
>seq19
Length=2486755
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| || || |||| |||||||| | | ||| | ||||||
Sbjct 1821816 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCT 1821757
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||| ||||| ||||| || || | ||| || |||||||| || ||||| ||||| |||
Sbjct 1821756 TCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCT 1821697
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||||||| || ||||||||||| | ||| || || || ||||| |||
Sbjct 1821696 TGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTC 1821637
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 1821636 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605
Score = 100 bits (110), Expect = 7e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| ||||||||||| | || || ||||| || || ||||| |||
Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|| || || ||||| ||| || ||||||||||| |||| ||||| || | |||
Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || | ||| || | || | ||||||
Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885
>seq28
Length=3612999
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | |||||||| |||||||| || || |||||
Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || |||||||| || ||||| |||||||| |||||||| ||| ||| |||
Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1575488
>seq27
Length=4195530
Score = 86.0 bits (94), Expect = 1e-11
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679
||||||||||||||||| ||||||| | ||||| |||| ||||||| ||| | |||
Sbjct 142245 CCTTCCCTCTCGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGA 142186
Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739
|||| ||| || || ||||| || | |||| ||| | ||| || | ||||
Sbjct 142185 CCGGAAGCCTCGTTAGGGCAGAACAATGTCCAGTCTTGGTTGGCTTCTACACGACGCATG 142126
Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
||||| |||| ||||| | ||| ||||| ||
Sbjct 142125 AAGAGATCAGGGGTCCACAAGGCATAGAACAG 142094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530283241640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |