Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq27 141 1e-28 seq17 93.3 6e-14 >seq27 Length=4195530 Score = 141 bits (156), Expect = 1e-28 Identities = 556/861 (65%), Gaps = 20/861 (2%) Strand=Plus/Minus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACA 77743 || || | ||| || || || ||||||| || | || |||| || ||||| || || Sbjct 142455 GAAGCCAAATTGCAGACAGCAACCTCATCAG-GAGCACAGTATTCAATAATCTCTGTGCA 142397 Query 77744 TAGATT---ACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGA 77800 || || ||||| |||||| || || || | |||||||||||| || ||||| | Sbjct 142396 GAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGC 142340 Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860 ||||| || || || ||||| | || || ||| |||| | |||| || | | ||| Sbjct 142339 ATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCA 142280 Query 77861 GACGACTCT-AGCTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGA--GTAT 77916 || | ||| ||| || | || || | ||| || || || || | ||| Sbjct 142279 GA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCT-TCCCTCTCGTACTTCTCGTAC 142222 Query 77917 ATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACA 77976 | ||| ||||| || || || | || || | | || | || || ||||| | Sbjct 142221 AAAGCA--TCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGCAGA 142164 Query 77977 TCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAG 78036 ||||| |||||| | | | || || ||| ||||||||||| |||| | | Sbjct 142163 ACAATGTCCAGTCTTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGG 142104 Query 78037 CAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAA 78096 || || ||||| |||| | |||||| || || ||||| ||| || || | Sbjct 142103 CATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCGTGGTTCTTGCGAAGGTCAAGGA 142044 Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | || ||| || ||||| || || || || || || | | ||||| || || | Sbjct 142043 ACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGT 141984 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 ||||||| || || | |||||||||||||| || | ||||| | ||| || | || || Sbjct 141983 TACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGAC 141924 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAAT 78274 |||| || || ||||| ||||| || || ||| | | || || | || Sbjct 141923 CGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGACAT 141864 Query 78275 GGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334 || | || || || || || ||| || || | || || || | ||||| || Sbjct 141863 TGAGA--CCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATA 141806 Query 78335 GATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394 ||||||||| || ||||| ||| |||||| | ||| || || || | || | | Sbjct 141805 GATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCG 141746 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 | ||| ||||| || || || || ||||| || || || || |||| | ||| | | Sbjct 141745 AGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATCAA 141686 Query 78455 ATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCAT 78514 |||||||| ||||| ||| || |||| | ||||| || || || |||||||| Sbjct 141685 GTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGCAT 141626 Query 78515 CAACATATGCTGAGGTCTTTC 78535 | ||| || || || | ||| Sbjct 141625 GATCATGTGTTGGGGACGTTC 141605 >seq17 Length=3189086 Score = 93.3 bits (102), Expect = 6e-14 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| || || || ||||| || || || || |||| ||||| | ||| Sbjct 3105901 TCGGAGTGAATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATC 3105842 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || || || || ||| |||| |||||||| || || |||||| |||||| Sbjct 3105841 TGAACTTCACCACTGAAACGCTCAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCA 3105782 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAG 48614 || || || | || || ||||| || ||| | | ||| | || |||||| Sbjct 3105781 AAGAAGGCGAGGACGTGCGAGATAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAG 3105722 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | | |||||| || | ||| | ||||| || ||||| || || || || || || Sbjct 3105721 TCGTGCAAATCTTTCGAGAGATCGATCTCTTCGGCAGTCCAGAAGGAGGCTTCGGCCTTC 3105662 Query 48675 TTATACATATTCCATAT 48691 || ||||| | ||| || Sbjct 3105661 TTGTACATTTGCCAGAT 3105645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668278998400