Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015- 01-16] 60 sequences; 36,402,801 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq19 165 2e-35 seq28 147 5e-30 seq27 105 1e-17 seq17 100 6e-16 >seq19 Length=2486755 Score = 165 bits (182), Expect = 2e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || |||| || | ||| || || ||||||||||| |||| | Sbjct 1821831 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 1821772 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| |||||||| || || ||||| ||||| || || ||||| || Sbjct 1821771 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 1821712 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| |||||||| |||||| || || | || || ||||| || | |||||| Sbjct 1821711 ATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 1821653 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 1821652 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 || ||||||||||||| ||| ||||| || || || || || || || |||||||||||| Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726 Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034 || || |||||| ||||| ||||||||||| || ||||| | || ||| | ||||| Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666 Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094 || || |||| || || || || ||||| ||||| || || | ||||| ||||| ||| Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606 Query 283095 TGCAT 283099 ||||| Sbjct 1820605 TGCAT 1820601 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 || ||||| || || || || || ||||||||||| || |||||| || ||||||||| Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || || || ||||| | || ||| | ||||| ||||| || | || || || || ||| Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || | |||||| || || || ||||| Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885 >seq28 Length=3612999 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || ||||||||||| || || || || |||||||||||| Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || ||||| || |||||||||||||| |||||||| | || || | ||| Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1575473 >seq27 Length=4195530 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || |||| || | ||| || || |||||||||||||| | Sbjct 1512084 ACCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 1512025 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || || || || ||||| ||||||||||| || ||||| || Sbjct 1512024 GAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 1511965 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 1511964 GATACCCTCCTTGTCT 1511949 >seq17 Length=3189086 Score = 100 bits (110), Expect = 6e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237 ||||| | |||| | |||||| | ||||||| |||| ||| | | |||| ||||| Sbjct 3106317 GTTGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAAC 3106376 Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297 | | | ||| | || || ||||| ||||| ||||| ||| | || || || || || Sbjct 3106377 TCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGC 3106436 Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357 || |||| || ||| ||| |||||||| | || |||||| ||| || || Sbjct 3106437 AACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCC 3106496 Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 || || || ||||||||||| |||||||| | || ||||| | | | ||||| Sbjct 3106497 GGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAAGGCTGGTGT 3106549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738395319240