Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20cellulolyticus_20[genbank_20GCA_5F000829775.1_202015-
01-16] 60 sequences; 36,402,801 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq19 165 2e-35
seq28 147 5e-30
seq27 105 1e-17
seq17 100 6e-16
>seq19
Length=2486755
Score = 165 bits (182), Expect = 2e-35
Identities = 175/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || |||| || | ||| || || ||||||||||| |||| |
Sbjct 1821831 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 1821772
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| |||||||| || || ||||| ||||| || || ||||| ||
Sbjct 1821771 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 1821712
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| |||||||| |||||| || || | || || ||||| || | ||||||
Sbjct 1821711 ATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 1821653
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 1821652 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 1821605
Score = 145 bits (160), Expect = 2e-29
Identities = 143/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974
|| ||||||||||||| ||| ||||| || || || || || || || ||||||||||||
Sbjct 1820785 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 1820726
Query 282975 CGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATA 283034
|| || |||||| ||||| ||||||||||| || ||||| | || ||| | |||||
Sbjct 1820725 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 1820666
Query 283035 GTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATC 283094
|| || |||| || || || || ||||| ||||| || || | ||||| ||||| |||
Sbjct 1820665 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 1820606
Query 283095 TGCAT 283099
|||||
Sbjct 1820605 TGCAT 1820601
Score = 105 bits (116), Expect = 1e-17
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001
|| ||||| || || || || || ||||||||||| || |||||| || |||||||||
Sbjct 1821042 CCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCC 1820983
Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061
|| || || ||||| | || ||| | ||||| ||||| || | || || || || |||
Sbjct 1820982 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTG 1820923
Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || || | |||||| || || || |||||
Sbjct 1820922 ATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 1820885
>seq28
Length=3612999
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || ||||||||||| || || || || ||||||||||||
Sbjct 1575651 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATC 1575592
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || |||||||||||||| |||||||| | || || | |||
Sbjct 1575591 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1575532
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 1575531 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1575473
>seq27
Length=4195530
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || |||| || | ||| || || |||||||||||||| |
Sbjct 1512084 ACCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 1512025
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| || || || || || ||||| ||||||||||| || ||||| ||
Sbjct 1512024 GAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 1511965
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 1511964 GATACCCTCCTTGTCT 1511949
>seq17
Length=3189086
Score = 100 bits (110), Expect = 6e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
||||| | |||| | |||||| | ||||||| |||| ||| | | |||| |||||
Sbjct 3106317 GTTGCCATTGAACAAGAGTTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAAC 3106376
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
| | | ||| | || || ||||| ||||| ||||| ||| | || || || || ||
Sbjct 3106377 TCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGC 3106436
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
|| |||| || ||| ||| |||||||| | || |||||| ||| || ||
Sbjct 3106437 AACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCC 3106496
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
|| || || ||||||||||| |||||||| | || ||||| | | | |||||
Sbjct 3106497 GGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAAGGCTGGTGT 3106549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738395319240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |