Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 131 3e-25 seq8 104 5e-17 >seq2 Length=5557896 Score = 131 bits (144), Expect = 3e-25 Identities = 182/250 (73%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 || || |||||||||||||| || || | || | ||| ||||| |||||||| || || Sbjct 1827333 CCGCCTGCAGTCTTGGAGATCATAGCACAGGTCTTCAAG-GTATCGTAAATACCTTCGAT 1827391 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCAC 94909 || || || | | | | | ||||||||| || | || |||||| ||| || ||| Sbjct 1827392 ACTGTCTTCCTTCATGTCGATAAGGAAGCAAGATGCGAGCTGGGGT-TGAGGGGTACCAG 1827450 Query 94910 AATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTT 94969 ||| |||| ||||| || ||||||||||| || | | |||||||||| || || | Sbjct 1827451 CATTGAACAACGTGGGAGACGCATGGGTAAAGTATTTCTGAGACATGAGATTGTAAGTCT 1827510 Query 94970 CAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 || | || | |||| ||||||||||||||||| |||||||||||||||| || Sbjct 1827511 CAGTCACTTTCTCAATGTTATCGCCGTGAATGCCGACAGCTACACGCATAATCATGTGCT 1827570 Query 95030 GAGGGCGCTC 95039 | || ||||| Sbjct 1827571 GGGGACGCTC 1827580 >seq8 Length=1961470 Score = 104 bits (114), Expect = 5e-17 Identities = 297/454 (65%), Gaps = 31/454 (7%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| || || || || ||||| || | || || || ||||||| Sbjct 754083 TTGTTGCCTTTGCTGCTGTCGAGGGTATTTTCTTCTCGGGCTCTTTTGCCTCGATTTTCT 754024 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | || | |||||||||| || | |||||| || | || || | | Sbjct 754023 GGCTTAAGAAGCGTGGCCTGATGCCTGGTCTGACGTTCTCCAACGAACTGATCTCCCGTG 753964 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | ||||| || || ||||||||| ||| ||||||| | ||| ||| Sbjct 753963 ATGAAGGCCTCCACACCGACTTTGCCTGCTTGCTGTTCTCTCACCTCAACGTT--CGCCC 753906 Query 102096 CA-TCAAGAG-------AAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACA 102147 | || ||| |||| ||| |||||| || |||||| | || || || Sbjct 753905 TAGTCCTGAGGTGGTTCAAAGCATT------ATTGTC---GATGCCGTCAGCATCGAGCA 753855 Query 102148 AGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAG 102207 ||||| | || | | |||||||| | | | || ||||||| |||| ||||| | Sbjct 753854 GGAATTCTTGACTGATGCCCTGCCTTGTGCTCTGCTCGGCATGAACTCCAAGCTGATGTG 753795 Query 102208 CCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAG------AAAA 102261 |||||||||||| ||||| || | | | ||| ||| ||| || | | || Sbjct 753794 CCAGTACATTGAGTTTGTTGC---TGACCGCTTGCTTG---TGGCTCTCGGTAACAAGAA 753741 Query 102262 GCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGAC 102321 | |||| || ||||||||||| || ||||| || || ||||| | ||||| Sbjct 753740 GTACTACAACTCCACCAACCCCTTTGATTTTATGGAGAACATCTCCCTTGCTGGCAAGAC 753681 Query 102322 CAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 |||||| || || ||| |||| | || || ||| Sbjct 753680 CAACTTCTTCGAGAAGCGAGTGGGTGACTACCAA 753647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582529230780