Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2 187 3e-42 seq8 100 4e-16 >seq2 Length=5557896 Score = 187 bits (206), Expect = 3e-42 Identities = 738/1149 (64%), Gaps = 18/1149 (2%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| |||||||| || ||||| || ||||||| | | | ||||| || |||||| Sbjct 1826724 GCAAGAGATGCCAAGTTGCACACAGCAACCTCATCTGGAGCACAATATTCAATAATCTCA 1826783 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 |||||||| ||| | || ||||| | || | ||| || ||||| ||||| || Sbjct 1826784 GTGCAAAGGTTAGAGCTGCGAATCGTTCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAA 1826843 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| ||||| ||||| || | ||||| || |||||| ||| | |||||| | | Sbjct 1826844 GCATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCCGTCTGAGCTTCCAGAATCGCGTAC 1826903 Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTC--CTTTCTCTTTCGTA--TAGAGT 63178 || | | || | |||| | | | | | | | ||||| ||||| | || Sbjct 1826904 CA-AAGCTTCTGGGCTTTGACGGTGCGTCG-ACCACGGCCCTCTCTCTCGTACTTTTCGT 1826961 Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238 | | | || ||||| || || | |||| | ||| | ||| ||| | ||||| Sbjct 1826962 AAAGA--GCATCAAACTCTTCGCCATATACATCGGCCAGACCAGGGGCTTCGTTGGGACA 1827019 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 | ||| | ||| ||| || ||| || || ||| |||||||| || |||| || Sbjct 1827020 GAACAATGTCCAGTCTTGGTTGGCCTCTACACGGCGCATGAAGAGATCGGGGGTCCACAG 1827079 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 ||| || || || | | | | || || || || ||||| ||||| | Sbjct 1827080 AGCGTAGAAGAGGTCACGAGCACGAACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCCAA 1827139 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 ||| | | || ||| || ||||| || || | ||| || || | | ||||| || || Sbjct 1827140 GAATTCAAAAACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAGGCACCAGGGCGCTT 1827199 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 ||||||||| || || | || || || ||||| || | || | | ||| |||| || Sbjct 1827200 GTTTCCTCCTTGGTCGACATACCTGGCAGTGTTGTTGAACACGCGGAGCATAGGAACAAG 1827259 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAAT 63538 |||||| || |||| || || ||| || || || ||| ||| || || Sbjct 1827260 ACCGTTGGAGGTACCGTTAGTTCCGCCAATGTACGAACCGGTGGAACGGATGCGGTGAAC 1827319 Query 63539 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63598 ||||| || || ||||| | || ||||| | || || || || || || || Sbjct 1827320 GTTCAGACCAATACCGCCTGCAGTCTTGGAGATCATAGCACAGGTCTTCAAGGTATCGTA 1827379 Query 63599 GATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63658 || ||||| || || || || |||||| | || || || | | ||| | | Sbjct 1827380 AATACCTTCGATACTGTCTTCCTTCATGTCGATAAGGAAGCAAGATGCGAGCTGGGGTTG 1827439 Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 || || || ||||| || || || ||||| || || ||||| |||| | ||| | || Sbjct 1827440 AGGGGTACCAGCATTGAACAACGTGGGAGACGCATGGGTAAAGTATTTCTGAGACATGAG 1827499 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGC 63776 |||||| |||||| | || ||| || || | ||||| || || || |||||| Sbjct 1827500 ATTGTAAGTCTCAGTCACT--TTCTCAATGTTATCGCCGTGAATGCCGACAGCTACACGC 1827557 Query 63777 ATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTT 63836 || | ||||||||| || | || ||| ||| ||| ||| || || || || | Sbjct 1827558 ATAATCATGTGCTGGGGACGCTCGGCAACCTTGCCGTTGATTCGCAGCAGATATGAGCGT 1827617 Query 63837 TCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCG 63894 || | ||| || || ||||| || | ||| ||||| || || || || | || ||| Sbjct 1827618 TCAAGAGTCTTGAACCCAAAGTATTGGTAGTTGAAA--TCACGGTCATACACGATGGCCG 1827675 Query 63895 AATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCGGA 63953 | |||| || || | || |||| || | ||| || || || || || ||| Sbjct 1827676 AGTTGAACTCCTCTGCGTGCTTCATAACGAT-TTCATATACATCTTTCGAGATCATGGGA 1827734 Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013 | | | || || ||||| |||| |||| | | | |||||| ||||| | ||| Sbjct 1827735 GCAGGCTTGTTGTTCTTAGGGTTAATGTAGTGGTAGAGATCCTCGATCACAGCCGAGAAT 1827794 Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073 | ||||| || | |||||| || || || | ||| || | ||||| || | ||| || Sbjct 1827795 TGCTTTTTCGTCTGCTTGTGGAGGTTGGAAACGGCAATACGAGCGGCAAGGACGGCGTAG 1827854 Query 64074 TCCGGATGT 64082 || |||||| Sbjct 1827855 TCGGGATGT 1827863 >seq8 Length=1961470 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| ||| || || || ||| ||| || || || || | || | |||||| || Sbjct 753927 AACAGCAAGCAGGCAAAGTCGGTGTGGAGGCCTTCATCACGGGAGATCAGTTCGTTGGAG 753986 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 ||||| || || ||||| ||||||||||| |||||||| || || || || || || || Sbjct 753987 AACGTCAGACCAGGCATCAGGCCACGCTTCTTAAGCCAGAAAATCGAGGCAAAAGAGCCC 754046 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33730 || ||||| || || || || ||||||||||||| ||| Sbjct 754047 GAGAAGAAAATACCCTCGACAGCAGCAAAGGCAACAAG 754084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816686764480