Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq12 114 1e-20 seq8 105 7e-18 >seq12 Length=1121391 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||||| ||||| |||||||| ||||| || || | |||| |||||| Sbjct 219783 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCTTC 219724 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||||||||| || ||| ||||||||||||| || || ||||| || ||||| ||||| Sbjct 219723 GAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCCTG 219664 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 |||||| || | | || | ||||||| | || || || | || | ||||| Sbjct 219663 GATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTT 219604 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||| | ||||| ||||| || |||||| Sbjct 219603 GCCGGTGAGAGTTTTGACGAAAATCTGCATA 219573 >seq8 Length=1961470 Score = 105 bits (116), Expect = 7e-18 Identities = 340/523 (65%), Gaps = 15/523 (3%) Strand=Plus/Minus Query 52549 GTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCC 52608 ||||| || | ||||| |||| || ||||| | ||||||| || | || | Sbjct 754159 GTTCCTTGCATTCGCAAGAAGGCCGACTGGGCCCTCCGATGGATCTCTGACAAGGAATCT 754100 Query 52609 ACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGT 52668 || |||||| | ||||| || || |||||| || || ||| | || || ||||| | Sbjct 754099 ACCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTCGAGGGTATTTTCTTCTCGGGCTCT 754040 Query 52669 TTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAA 52727 ||||| | || || | | || || | ||| | | ||||| || || ||||| ||| Sbjct 754039 TTTGCCTCGATTTTCTGGCTTAAGAAGCGTGGCC-TGATGCCTGGTCTGACGTTCTCCAA 753981 Query 52728 CGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATTATAATA 52786 ||| |||| || || || ||||| | ||||| || ||||| || ||| | || | Sbjct 753980 CGAACTGATCTCCCGTGATGAAGGCCTCCACACCGACTTTGCCTGCTTGCTGTTCT---- 753925 Query 52787 CGCGCGTTAAAGAAAAATTGTCATA----TGAAAAAATTCTAGACATGTTTAAAGAGGCC 52842 | | | | || | | | | || ||| ||| | ||| || || ||| Sbjct 753924 CTCACCTCAACGT----TCGCCCTAGTCCTGAGGTGGTTCAAAGCATTATTGTCGATGCC 753869 Query 52843 GTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAAC 52902 ||| ||| || | || || || || || || | || | || | ||||||||| Sbjct 753868 GTCAGCATCGAGCAGGAATTCTTGACTGATGCCCTGCCTTGTGCTCTGCTCGGCATGAAC 753809 Query 52903 GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGT 52962 | | |||||||| ||||||| ||||||||||| ||| | || | || |||||| Sbjct 753808 TCCAAGCTGATGTGCCAGTACATTGAGTTTGTTGCTGACCGCTTGCTTGTGGCTCTCGGT 753749 Query 52963 CAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAG 53022 | ||| ||||| || | ||||||||| |||||| | ||||| || || | Sbjct 753748 AACAAGAAGTACTACAACTCCACCAACCCCTTTGATTTTATGGAGAACATCTCCCTTGCT 753689 Query 53023 GGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAA 53065 ||||| || ||||| ||||||| || ||||| || ||| ||| Sbjct 753688 GGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTACCAAA 753646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063280707200