Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04-
29] 116 sequences; 34,715,840 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq12 114 1e-20
seq8 105 7e-18
>seq12
Length=1121391
Score = 114 bits (126), Expect = 1e-20
Identities = 152/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| ||||||| ||||| |||||||| ||||| || || | |||| ||||||
Sbjct 219783 AACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCTTC 219724
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
||||||||| || ||| ||||||||||||| || || ||||| || ||||| |||||
Sbjct 219723 GAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCCTG 219664
Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
|||||| || | | || | ||||||| | || || || | || | |||||
Sbjct 219663 GATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTT 219604
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||| | ||||| ||||| || ||||||
Sbjct 219603 GCCGGTGAGAGTTTTGACGAAAATCTGCATA 219573
>seq8
Length=1961470
Score = 105 bits (116), Expect = 7e-18
Identities = 340/523 (65%), Gaps = 15/523 (3%)
Strand=Plus/Minus
Query 52549 GTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCC 52608
||||| || | ||||| |||| || ||||| | ||||||| || | || |
Sbjct 754159 GTTCCTTGCATTCGCAAGAAGGCCGACTGGGCCCTCCGATGGATCTCTGACAAGGAATCT 754100
Query 52609 ACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGT 52668
|| |||||| | ||||| || || |||||| || || ||| | || || ||||| |
Sbjct 754099 ACCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTCGAGGGTATTTTCTTCTCGGGCTCT 754040
Query 52669 TTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAA 52727
||||| | || || | | || || | ||| | | ||||| || || ||||| |||
Sbjct 754039 TTTGCCTCGATTTTCTGGCTTAAGAAGCGTGGCC-TGATGCCTGGTCTGACGTTCTCCAA 753981
Query 52728 CGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATTATAATA 52786
||| |||| || || || ||||| | ||||| || ||||| || ||| | || |
Sbjct 753980 CGAACTGATCTCCCGTGATGAAGGCCTCCACACCGACTTTGCCTGCTTGCTGTTCT---- 753925
Query 52787 CGCGCGTTAAAGAAAAATTGTCATA----TGAAAAAATTCTAGACATGTTTAAAGAGGCC 52842
| | | | || | | | | || ||| ||| | ||| || || |||
Sbjct 753924 CTCACCTCAACGT----TCGCCCTAGTCCTGAGGTGGTTCAAAGCATTATTGTCGATGCC 753869
Query 52843 GTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAAC 52902
||| ||| || | || || || || || || | || | || | |||||||||
Sbjct 753868 GTCAGCATCGAGCAGGAATTCTTGACTGATGCCCTGCCTTGTGCTCTGCTCGGCATGAAC 753809
Query 52903 GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGT 52962
| | |||||||| ||||||| ||||||||||| ||| | || | || ||||||
Sbjct 753808 TCCAAGCTGATGTGCCAGTACATTGAGTTTGTTGCTGACCGCTTGCTTGTGGCTCTCGGT 753749
Query 52963 CAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAG 53022
| ||| ||||| || | ||||||||| |||||| | ||||| || || |
Sbjct 753748 AACAAGAAGTACTACAACTCCACCAACCCCTTTGATTTTATGGAGAACATCTCCCTTGCT 753689
Query 53023 GGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAA 53065
||||| || ||||| ||||||| || ||||| || ||| |||
Sbjct 753688 GGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTACCAAA 753646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063280707200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |