Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04-
29] 116 sequences; 34,715,840 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq12 89.7 4e-13
>seq12
Length=1121391
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
||||||||||||||||| || | | | || || |||| ||||||||||| || || |
Sbjct 219536 TCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGGC-CGTCTTCCAGCTGCTTTCCAGCGAA 219478
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| |||||||| || || || | | ||||||||| ||| ||| ||||| |
Sbjct 219477 GATCAAACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 219418
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || ||||| |||| |||||| || | || ||||| || || |||||||| ||
Sbjct 219417 GTCG--ATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTG 219360
Query 48713 ACAAAAATCTGCAT 48726
|| || ||||||||
Sbjct 219359 ACGAAGATCTGCAT 219346
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576
|| || ||||| || || ||||| |||||||| |||| | | || || |||| ||
Sbjct 219782 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGC-CGTCTTC 219724
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||| || ||| | | || | ||| || || || || | | ||||||||||
Sbjct 219723 GAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCCTG 219664
Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
|||||| ||||| | | || ||||| |||| ||| || || | ||| |||||
Sbjct 219663 GATTTTCGACTTGACGTTGTCG--ATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTC 219606
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||||||||| || |||||||||||
Sbjct 219605 TTGCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250604456116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |