Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq12 145 6e-30 seq2 96.9 3e-15 seq7 91.5 1e-13 >seq12 Length=1121391 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||| | ||||| || || |||| | ||||| ||| | || Sbjct 219574 ATGCAGATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCC 219633 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||||| || |||||||| || || || || || ||| Sbjct 219634 GACACCATCGACAACGTCAAGTCGAAAATCCAGGACAAGGAAGGAATCCCTCCTGACCAA 219693 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||||||||||||| | || || |||||| |||| || |||||| Sbjct 219694 CAACGTCTGATCTTTGCCGGCAAACAGCTCGAAGACGGCCGCACTCTCTCTGACTACAAC 219753 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||| || | || || ||| | || |||| || ||| Sbjct 219754 ATCCAAAAAGAATCTACTCTTCACTTGGTTCTCCGCCTGCGTGGTGGT 219801 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | || || || || |||| || || || ||| | | Sbjct 219802 ATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACTATCACACTCGAGGTTGAATCGTCA 219861 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || ||||||||||||||||| ||||| || ||| Sbjct 219862 GACACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 219921 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| ||||| || | || ||| ||||| | ||||| |||||| Sbjct 219922 CAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACACTGTCCGACTACAAC 219981 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || || || | ||| | ||||| || Sbjct 219982 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGACTCCGCGGTGG 220028 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || |||||||||| || || || || Sbjct 219063 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 219122 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||| || || || ||||| ||| Sbjct 219123 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAA 219182 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||||||| | ||||| ||||||| | || || |||||| Sbjct 219183 CAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTTTCTGACTACAAC 219242 Query 22399 ATTCA 22403 ||||| Sbjct 219243 ATTCA 219247 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| | ||||| || | || Sbjct 219346 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAAGTCGAGTCTTCC 219405 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || || || || ||| Sbjct 219406 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAA 219465 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || ||| | || || |||||| |||| || |||||| Sbjct 219466 CAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAAGACGGCCGCACTCTCTCGGACTACAAC 219525 Query 22399 ATTCAAAAAGAATCCACC 22416 |||||||| ||||| ||| Sbjct 219526 ATTCAAAAGGAATCTACC 219543 >seq2 Length=5557896 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || || ||||| ||||||||||| || || |||||||| ||| | || Sbjct 3220657 AGACAAGGAGGGCATCCCCCCCGACCAACAACGTCTAATCTTCGCCGGCAAGCAGCTCGA 3220716 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || ||||||| | || || |||||||| || || || || ||| | || | || | Sbjct 3220717 AGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTGCT 3220776 Query 22431 GCGATTGCGCGGAGGT 22446 ||| ||||||| ||| Sbjct 3220777 GCGTCTGCGCGGTGGT 3220792 >seq7 Length=2062375 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || |||| ||| | Sbjct 1638414 TTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 1638355 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || |||||||| || || || ||||| ||||| || || Sbjct 1638354 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCCCCCGACCAACAGCGCCT 1638295 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| |||||| | ||| ||||||||||| || Sbjct 1638294 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTAGCGACTACAACATTCAGAA 1638235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727406609540