Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04-
29] 116 sequences; 34,715,840 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq8 102 2e-16
seq2 86.0 1e-11
>seq8
Length=1961470
Score = 102 bits (112), Expect = 2e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
||||||||||| | || ||| | |||||||| || || || || |||||| | | |
Sbjct 753817 GGCATGAACTCCAAGCTGATGTGCCAGTACATTGAGTTTGTTGCTGACCGCTTGCTTGTG 753758
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| || ||| | |||| |||||||||| |||||||||| ||||||||| |||
Sbjct 753757 GCTCTCGGTAACAAGAAGTACTACAACTCCACCAACCCCTTTGATTTTATGGAGAACATC 753698
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
|| ||| || || || ||||||||||| ||||| || |||| || |||
Sbjct 753697 TCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTACCAA 753647
Score = 98.7 bits (108), Expect = 2e-15
Identities = 252/371 (68%), Gaps = 16/371 (4%)
Strand=Plus/Minus
Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC-AGC 298145
||| || |||||||||| |||||||| | || || | || | | ||||||| | |
Sbjct 1309449 GATTGGAGTGATGAACTCAATCAAGAACTCGGGGATCTTCAGCAAACTAGGGAACTGAAC 1309390
Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205
| || | ||||| || | | ||| |||||| ||||||| |||| || ||||
Sbjct 1309389 T-TGTAGGAAGTTAATCAGTAAACCTTTGATGTGACTTCCGTCGTGATCCTGATCAGTCA 1309331
Query 298206 TGATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 298264
||||||| | ||| || || || || | || ||||| ||| |||| | ||
Sbjct 1309330 TGATCATGAGATGGCCATATCGTAAACCGCGA-GTGTCAGCGTATTCTTTCTTGTGCTGC 1309272
Query 298265 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCACG 298321
| ||||| ||| || || | ||| ||||||| |||| |||| ||| ||| ||||
Sbjct 1309271 AAGCCGATGAAGTTCTTGATGTTCTG-GATTTCTGCGTTTTTCGAGAT--TTGATCCACT 1309215
Query 298322 GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGA 298381
|||||||| || ||||||| || ||||| ||||| |||||||| || | ||| |
Sbjct 1309214 GATGCATCACGAACATTCAGCAGCTTTCCTCGAAGCGGGAACACGCCGAACAAATCGGGG 1309155
Query 298382 CCGACCACGGACAGCCCTGCGATTGC-AAGTGTCGCT--GCGGAATCCCCCTCCGTCAGA 298438
||||| |||| | || || || || ||| | || || || || || || |||||
Sbjct 1309154 CCGACGACGGCACGGCCAGCCATGGCTAAG---CCCTTGGCTGAGTCACCTTCTGTCAGG 1309098
Query 298439 ATGAGAGTGCA 298449
|| || |||||
Sbjct 1309097 ATAAGCGTGCA 1309087
>seq2
Length=5557896
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 333794 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTT 333853
|||||| || |||| ||||| ||||||||||| ||||||| || | | || |
Sbjct 4295236 GGTGCAGACTTCGTCCAGGAAACCGGAGTCGTGACTGACAATCAAGCTAGTGATCTCAGT 4295177
Query 333854 AAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 333913
| ||| ||| || ||||||| | || || | ||| || || ||||| ||
Sbjct 4295176 GTGCGCTTTCAAGTACTCCTGCAGCCACTTGACATTGGCGACATCCAGGTGATTGGTAGG 4295117
Query 333914 CTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 333973
|||||||| | ||| | | || |||| ||||| ||||| |||||||| ||||||||
Sbjct 4295116 TTCGTCAAGCAATAGGACATCGGCTTTCATAAGCATGGCACGCGCAAGAGCAAGTTTCAT 4295057
Query 333974 TTTCCACCCTCCTGAAAGAG 333993
||||| || || || ||||
Sbjct 4295056 CTTCCATCCACCAGACAGAG 4295037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878360844600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |