Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq12 129 6e-25 seq8 98.7 9e-16 >seq12 Length=1121391 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || |||||||| ||||| || | ||||| || || ||||| |||||| Sbjct 219542 GTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGGCCGTCTTCCAGCTGCTTTCCA 219483 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| ||||| || || || || ||||||||||||||| || ||| |||| Sbjct 219482 GCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 219423 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | ||||||||| | ||| | || ||||| || ||||| Sbjct 219422 ACGTTG-TCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTCTTGCCAGTGAGAGT 219364 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 219363 CTTGACGAAGATCTGCAT 219346 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| |||||||| || ||||| || Sbjct 219800 CCACCACGCAGGCGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 219741 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || |||||||| || || |||||| || || || || ||||| Sbjct 219740 AGAGTGCGGCCGTCTTCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGG 219681 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||||||| ||||| ||||| ||| |||||| | | || || Sbjct 219680 ATTCCTTCCTTGTCCTGGATTTTCGACTTGACGTTGT-CGATGGTGTCGGAAGATTCAAC 219622 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || |||||||| |||||||| || ||||||||||| Sbjct 219621 TTCCAATGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574 Score = 102 bits (112), Expect = 8e-17 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| |||||| | |||| ||||| || |||||||| ||||| |||||| Sbjct 219217 TCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTG 219158 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| ||||| ||| |||||| | |||||| || | || | Sbjct 219157 TCCTGGATCTTGGACTTGACGTTGT-CGATGGTGTCGGAGGACTCGACCTCAAGAGTGAT 219099 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || ||||| || || || || || ||||||||||||| Sbjct 219098 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATGG 219061 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||| | |||||| || | || ||||| || || || ||||| ||| | Sbjct 220028 CCACCGCGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 219969 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || || ||||| |||| | || || || || || || Sbjct 219968 AGTGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGG 219909 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || ||| | | |||| ||||| | || || Sbjct 219908 ATACCCTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCTGACGATTCAACC 219849 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || ||||| || || || ||||| ||||| Sbjct 219848 TCGAGTGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 219802 >seq8 Length=1961470 Score = 98.7 bits (108), Expect = 9e-16 Identities = 282/426 (66%), Gaps = 17/426 (4%) Strand=Plus/Minus Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGA 47219 |||||||| | |||||||||||| ||||| |||| || | | || | || Sbjct 754066 GTCGAGGGTATTTTCTTCTCGGGCTCTTTTGCCTCGATTTTCTGGCTTAAGAAGCGTGGC 754007 Query 47220 GTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACC 47279 | ||||| || || ||||| |||||| || ||||| | || |||||||| |||||| Sbjct 754006 CTGATGCCTGGTCTGACGTTCTCCAACGAACTGATCTCCCGTGATGAAGGCCTCCACACC 753947 Query 47280 AACTTTGCCTGT---CTCTACTA-CAACACTAGAGTCGATCAAAAGTTGGACGTGCCCAC 47335 |||||||||| || | || || | | | ||| | | || | ||| Sbjct 753946 GACTTTGCCTGCTTGCTGTTCTCTCACCTCAACGTTCGCCCTAGTCCTG-AGGTGGT--- 753891 Query 47336 CGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCT 47395 ||| | ||| ||| ||| |||||| ||| ||| ||| || || | || || || Sbjct 753890 --TCAAAG-CATTATTGTCGATGCCGTCAGCATCGAGCAGGAATTCTTGACTGATGCCCT 753834 Query 47396 GCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGC 47455 ||| || | | || |||||| | || ||||| | ||||||| || ||||| || Sbjct 753833 GCCTTGTGCTCTGCTCGGCATGAACTCCAAGCTGATGTGCCAGTACATTGAGTTTGTTGC 753774 Query 47456 CGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACA---CCGAGAATCCATT 47512 |||||| |||| || || ||| | |||| ||| ||| || || || || Sbjct 753773 TGACCGCTTGCTTGTGGCTCTCG-GTAAC--AAGAAGTACTACAACTCCACCAACCCCTT 753717 Query 47513 CGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGG 47572 || |||||| | ||||| || || | |||||||||||||| ||||||||||| || || Sbjct 753716 TGATTTTATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGG 753657 Query 47573 CGAATA 47578 || || Sbjct 753656 TGACTA 753651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500110523840