Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 138 3e-27 seq7 98.7 2e-15 seq2 91.5 3e-13 >seq12 Length=1121391 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || || |||||||| | ||||||||| | | ||| | || ||| Sbjct 219557 AGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGGCCGTCT 219498 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| | |||||| ||||| || || || || ||| Sbjct 219497 TCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 219438 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || ||||| ||||| ||| Sbjct 219437 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTC 219378 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || || || Sbjct 219377 TTGCCAGTGAGAGTCTTGACGAAGATCTG 219349 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| ||||| || || ||||||| ||||||||||| | ||| | || ||| Sbjct 219785 AGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCT 219726 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || ||||| ||||| ||||| || ||||| ||| |||||||| ||| Sbjct 219725 TCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCC 219666 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| |||| |||||| | | ||| || ||||| ||||| ||| Sbjct 219665 TGGATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTC 219606 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || ||||| || Sbjct 219605 TTGCCGGTGAGAGTTTTGACGAAAATCTG 219577 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || | |||||| ||||||||||| |||| ||||||||| | || || Sbjct 220022 CGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTG 219963 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| ||||| || || ||||| ||||| || ||||| || || || Sbjct 219962 CGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCC 219903 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| |||||| |||| ||||||| | ||| || || | Sbjct 219902 TCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCTGACGATTCAACCTCGAGT 219843 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || || |||||||| Sbjct 219842 GTGATAGTCTTTCCAGTCAGGGTCTTGACGAAAATTTG 219805 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 ||||||||||| | || | || || || ||||| || || ||||| || || ||||| Sbjct 219242 GTTGTAGTCAGAAAGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTG 219183 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||||| ||| || ||||| ||||| ||||| ||| ||| |||| |||||| Sbjct 219182 TTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTC 219123 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | | || || || | ||||| ||||| |||||||| || || || ||||| || Sbjct 219122 GGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTG 219066 >seq7 Length=2062375 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||| || | ||||||||| || || ||| | ||||| || |||||||||||||||||| Sbjct 1638233 CCTTCTGAATGTTGTAGTC-GCTAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAG 1638291 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || || ||||| ||||| || |||||||| ||||| ||||| ||| || Sbjct 1638292 ATCAGGCGCTGTTGGTCGGGGGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTG 1638351 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 |||| |||||| | | || || || | ||||| ||||| ||||| || || || || Sbjct 1638352 TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 1638411 Query 199619 AAA 199621 ||| Sbjct 1638412 AAA 1638414 >seq2 Length=5557896 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || ||||||||||| |||| ||||||||| | | || Sbjct 3220785 CGCAGACGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 3220726 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || ||||| |||||||| ||||||||||| ||||| || ||||| || Sbjct 3220725 CGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGACGTTGTTGGTCGGG 3220676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919847827772