Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 102 5e-16 >seq12 Length=1121391 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || | ||||| ||| |||||| | || || |||| ||||| Sbjct 219795 ACGCAGGCGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGT 219736 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| || || || || ||||| || ||||||||||| |||||||| ||||| Sbjct 219735 GCGGCCGTCTTCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCC 219676 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| || || || ||||| || || || || | | | || || ||| Sbjct 219675 TTCCTTGTCCTGGATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAA 219616 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||||||||| || |||||||| || Sbjct 219615 -TGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAAATCTG 219577 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| |||||||||||||| ||||| || || || ||||| Sbjct 219957 ATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCCTT 219898 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| || ||| || || || || | | | || || || || Sbjct 219897 GTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCTGACGATTCAACCTCGAGTGTGAT 219838 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||| ||||||||||| Sbjct 219837 AGTCTTTCCAGTCAGGGTCTTGACGAAAATTTG 219805 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || || || ||| ||| || || || || || | ||||| Sbjct 219567 ACGCAGACGAAGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGT 219508 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| || ||||||||||| || || | ||| ||||| ||||| || || || Sbjct 219507 GCGGCCGTCTTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCC 219448 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| |||||||| ||||| || || || || | | | | || ||| Sbjct 219447 CTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAA 219388 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||||||||| ||||| || || Sbjct 219387 -GGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 219349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268174224197168