Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 136 5e-26 seq2 132 6e-25 seq8 127 2e-23 >seq5 Length=2218739 Score = 136 bits (150), Expect = 5e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||||||||||||||| ||||||||| | || |||||| | || || ||| Sbjct 245182 GCGGCCAACTACCTCGACATCAAGCCCCTGCTCGATGTCGGCTGCAAGACCGTCGCAAAC 245123 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || ||||| |||||||||||||| || |||||| || ||| Sbjct 245122 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGCAAGACTTTCAACATCCAGAACG 245068 >seq2 Length=5557896 Score = 132 bits (146), Expect = 6e-25 Identities = 250/360 (69%), Gaps = 12/360 (3%) Strand=Plus/Plus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154 || ||||||||||||| | || | |||||||||||| |||||||| || ||| ||| Sbjct 1462421 CTATGGCGAGTCGCAC-TGCCGCTCAGTCGGCTGCATCGTCGACGGCTGCCCCCCGGGCA 1462479 Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214 || | || |||||| |||||||||||||||| || ||| || | || |||||| ||| Sbjct 1462480 TGGCCTTGACCGAGGACGACATCCAGCCTCAGATGACTCGACGGAGGCCCGGCCAGAGCG 1462539 Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274 | ||| |||| || |||||||| || || ||| || |||||||| ||||| | Sbjct 1462540 CGCTTACCACTCCACGCAACGAAAAGGACCGAGTCGAGATTCAGTCGGGTACGGAATTTG 1462599 Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCG 18334 | | || |||||| |||| ||| | |||| |||| ||||| |||||| | Sbjct 1462600 GGTTTACTCTCGGCACGCCGATCGCATTGATTGTTCGCAACGAGGACCAACGGCCCAAGG 1462659 Query 18335 ACTATTCCGACATGTGCAAGG----TG---CCGCGGCCCTCACACGCCGACTACACCTAC 18387 |||| | || | ||| | || || |||||| || ||||| ||||||||| Sbjct 1462660 ACTACGGTGGCA-GCACAATGGATCTGTACCCTCGGCCCAGCCATGCCGATTACACCTAC 1462718 Query 18388 ATGGCCAAGTACGGCATCAAGGCGTCGTCG-GGCGGAGGCCGGTCGTCTGCCCGCGAGAC 18446 | | || ||||| ||||||| | | | || ||||| || |||||||||||| Sbjct 1462719 CTTGAGAAATACGGAGTCAAGGC-TAGCAGTGGAGGAGGTCGCAGCAGTGCCCGCGAGAC 1462777 Score = 95.1 bits (104), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1628443 CGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCC 1628502 |||||||| ||||| || |||||||| ||||| |||||||| || || || ||| Sbjct 1827051 CGGCGCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAGAGGTCACGAGCACGAACCTCT 1827110 Query 1628503 TCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCC 1628562 ||||||||||||||||| ||| || | | || | || || | |||||| ||||| Sbjct 1827111 TCCTTGCCGTGGTTCTTGCGGAGATCCAAGAATTCAAAAACATCCGAGTGCCATGGCTCG 1827170 Query 1628563 AGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 1628592 |||||| |||||||| || ||||||| Sbjct 1827171 AGGTAGATAGCAAAGGCACCAGGGCGCTTG 1827200 Score = 87.8 bits (96), Expect = 2e-11 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 19018 AGGCCATTGAAGACGCCAAGCGCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTG 19076 ||| ||||||||| | ||| ||||| ||||||||||| || || |||| ||| ||| Sbjct 1463074 AGGTCATTGAAGAGTTCC-GCGACAAGAAAGACAGCATCGGAGGTACCGTGATGTGTGTG 1463132 Query 19077 TGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTC 19136 |||||| || || | || || || ||||| || || |||||| | || || ||| Sbjct 1463133 ATTCGCAATGTTCCCGTTGGTCTGGGTGAGCCCTGTTTCGACAAGCTGGAAGCACAGCTG 1463192 Query 19137 GCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATTCGAGATTGG 19183 | ||| |||||| || || || || |||||||| || || ||||| Sbjct 1463193 GGCCATGCCATGATGAGTATTCCTGCTACCAAGGGCTTTGAAATTGG 1463239 >seq8 Length=1961470 Score = 127 bits (140), Expect = 2e-23 Identities = 174/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| || ||||| ||| |||||| |||||||||||||| | || ||||| Sbjct 753641 CGCCTTTTGGTAGTCACCCACTCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGAT 753700 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 |||||| | || ||||||| | ||||||| ||| | | ||||| | | | Sbjct 753701 GTTCTCCATAAAATCAAAGGGGTTGGTGGAGTTGTAGTACTTCTTGTTACCGAGAGCCAC 753760 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| |||||| || |||||||| |||||||||||||| || || ||||||||||| Sbjct 753761 AAGCAAGCGGTCAGCAACAAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCGAG 753820 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || || ||||| | || ||| || || | |||||| |||||| ||||| || Sbjct 753821 CAGAGCACAAGGCAGGGCATCAGTCAAGAATTCCTGCTCGATGCTGACGGCATCGACAAT 753880 Query 868930 GAT 868932 || Sbjct 753881 AAT 753883 Score = 93.3 bits (102), Expect = 5e-13 Identities = 138/194 (71%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||| || || ||||| ||||||| || | || || ||||| ||||| |||||| Sbjct 753957 CCTTCATCACGGGAGATCAGTTCGTTGGAGAACGTCAGACCAGGCATCAGGCCACGCTTC 754016 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || || | | ||| ||||||||| || || |||||||| || |||||| Sbjct 754017 TTAAGCCAGAAAATCGAGGCAAAAGAGCCCGAGAAGAAAATACCCTCGACAGCAGCAAAG 754076 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGCC 869356 | | || |||| ||||||||| || ||||||| |||||| | ||| Sbjct 754077 GCAACAAGACGCTGGGCAAAGGTA--GAT----TCCTTGTCAGAGATCCATCGGAGGGCC 754130 Query 869357 CAGTCGGCCttttt 869370 ||||||||||| || Sbjct 754131 CAGTCGGCCTTCTT 754144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107129680496772