Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5 131 3e-24 seq8 118 2e-20 seq2 96.9 5e-14 seq1 86.0 1e-10 >seq5 Length=2218739 Score = 131 bits (144), Expect = 3e-24 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||||||||||||||||||||| |||||| | || ||||||||||| || ||| Sbjct 245182 GCGGCCAACTACCTCGACATCAAGCCCCTGCTCGATGTCGGCTGCAAGACCGTCGCAAAC 245123 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || ||||| || ||||||||||| || |||||| || ||| Sbjct 245122 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGCAAGACTTTCAACATCCAGAACG 245068 >seq8 Length=1961470 Score = 118 bits (130), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| |||||||| || || ||||| ||| |||||| |||||||||||||| | | Sbjct 753634 TGACACCCGCCTTTTGGTAGTCACCCACTCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 753693 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | || ||||||| | ||||| ||||| | |||| Sbjct 753694 GGGAGATGTTCTCCATAAAATCAAAGGGGTTGGTGGAGTTGTAGTACTTCTTGTTACCGA 753753 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | |||||| |||||| || || || ||||||||||||||||| || || ||||| Sbjct 753754 GAGCCACAAGCAAGCGGTCAGCAACAAACTCAATGTACTGGCACATCAGCTTGGAGTTCA 753813 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || ||||| | || | | || || | |||||| |||||| | Sbjct 753814 TGCCGAGCAGAGCACAAGGCAGGGCATCAGTCAAGAATTCCTGCTCGATGCTGACGGCAT 753873 Query 794131 CGA 794133 ||| Sbjct 753874 CGA 753876 >seq2 Length=5557896 Score = 96.9 bits (106), Expect = 5e-14 Identities = 179/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| | || |||| ||| || ||||||||||| || ||||| |||||||| Sbjct 1827210 TGGTCGACATACCTGGCAGTGTTGTTGAACACGCGGAGCATAGGAACAAGACCGTTGGAG 1827269 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| || || | | ||| | || | || || | ||| || | || Sbjct 1827270 GTACCGTTAGTTCCGCCAATGTACGAACCGGTGGAACGGATGCGGTGAACGTTCAGACCA 1827329 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | ||||||||| | || || | |||| || ||||| || || ||| Sbjct 1827330 ATACCGCCTGCAGTCTTGGAGATCATAGCACAGGTCTTCAAGGTATCGTAAATACCTTCG 1827389 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | || ||||| || | | || || | | || || Sbjct 1827390 ATACTGTCTTCCTTCATGTCGATAAGGAAGCAAGATGCGAGCTGGGGTTGAGGGGTACCA 1827449 Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803 |||||||| | |||||| | ||| Sbjct 1827450 GCATTGAACAACGTGGGAGACGC 1827472 >seq1 Length=6192107 Score = 86.0 bits (94), Expect = 1e-10 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||||||| || || || || ||||||||| |||||| ||| || ||| Sbjct 2072978 GTACTTGGTGACGGCCTTTGTGCCTTCCGAAACGGCGTGCTTGGCCAATTCACCAGGCAG 2073037 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | ||||||||| || |||| Sbjct 2073038 GATAAGACGGACAGAGGTCTGGATTTCCCGGG 2073069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916234060550924