Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 194 2e-44 >seq2 Length=5557896 Score = 194 bits (214), Expect = 2e-44 Identities = 561/853 (66%), Gaps = 19/853 (2%) Strand=Plus/Plus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 |||||||| ||||| ||||| |||||| | | || || | ||| || || || Sbjct 1826730 GATGCCAAGTTGCACACAGCAACCTCATCTGGAGCACAATATTCAATAATCTCAGTGCAA 1826789 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | ||| || || |||||| |||| ||||||||||| |||||||||||||| |||||| Sbjct 1826790 AGGTTAGAGCTGCGAATCGTTCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCC 1826849 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420 ||||| |||||| |||| | || ||||||||||| | || ||||| || | ||||| | Sbjct 1826850 TTGTAAAGCATGAAGGGGTTTCCAGTCTCCGTCTGAGCTTCCAGAATCGCGTACCAAAGC 1826909 Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 111479 || | |||| || | |||| | || || ||||| |||||||||| ||| || | Sbjct 1826910 TTCTG-GGCTTTGACGGT-GCGTCGACCACGGCCCTCTCTCTCGTACTTTTCGTAAAGAG 1826967 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 111539 | |||||||| || || | |||| ||||| || || | || |||||||| | | Sbjct 1826968 CATCAAACTCTTCGCCATATACATCGGCCAGACCAGGGGCTTCGTTGGGACAGAACAATG 1827027 Query 111540 ACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 111597 ||| | | || |||| || || |||||| || || || ||||||| | | Sbjct 1827028 TCCA--GTCTTGGTTGGCCTCTACACGGCGCATGAAGAGATCGGGGGTCCACAGAGCGTA 1827085 Query 111598 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657 ||||| || | | ||| ||||||| | || ||||| || | || | ||| || Sbjct 1827086 GAAGAGGTCACGAGCACGAACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCCAAGAATTC 1827145 Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC----- 111712 | | ||||| |||||||||||| || |||| || | | || | ||| Sbjct 1827146 AAAAACATCCGAGTGCCATGGCTCGAGGTAGATAGCAAAGGCACC---AGGGCGCTTGTT 1827202 Query 111713 -CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 || |||| | ||||| | || ||| ||| || ||||| ||||| |||| || ||| Sbjct 1827203 TCCTCCTTGGTCGACATACCTGGCAGTGTTGTTGAACACGCGGAGCATAGGAACAAGACC 1827262 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831 | || ||| || || || | ||| || ||| | | || | || Sbjct 1827263 GTTGGAGGTACCGTTAGTTCCGCCAATGTACGAACCGGTGGAACGGATGCGGTGAACGTT 1827322 Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 || |||||||| || || ||| ||||| ||||| | | | || | || || Sbjct 1827323 CAGACCAATACCGCCTGCAGTCTTGGAGATCATAGCACAGGTCTTCAAGGTATCGTAAAT 1827382 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951 ||| | ||| ||| ||||| || |||||||||||||| | | ||| ||| || Sbjct 1827383 ACCTTCGATACTGTCTTCCTTCATGTCGATAAGGAAGCAAGATGCGAGCTGGGGTTGAGG 1827442 Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGT 112010 |||||||||||||| | || || | || || | || || | || ||||| | Sbjct 1827443 GGTACCAGCATTGAACAACGTGGGAGACGCATGGGTAAAGTATTTC-TGAGACATGAGAT 1827501 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||| ||||| || ||||||| || ||||| ||||||| || || ||||| | Sbjct 1827502 TGTAAGTCTCAGTCACTTTCTCAATGTTATCGCCGTGAATGCCGACAGCTACACGCATAA 1827561 Query 112071 ACATGTACTGTGG 112083 ||||| ||| || Sbjct 1827562 TCATGTGCTGGGG 1827574 Score = 86.0 bits (94), Expect = 8e-12 Identities = 210/315 (67%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 |||||||| || || ||||||| ||| ||||| |||| ||||||| | | || ||| Sbjct 2616969 GCATCAATTTCGTCGATGAAGATAATGCATGGCGTGTTTTTGCGGGCGTTGGCGAAAAGA 2616910 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749 || ||||| | | ||| |||||||||||||| || ||||| | ||| | ||| Sbjct 2616909 TCACGAACACGGGATGGACCAACACCAACAAACATTTCAACAAACT---CGG--AACCAC 2616855 Query 11750 TG-----GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804 || || ||| || || || ||||| || |||| ||| || | ||||| | Sbjct 2616854 TGACGCTGAAGAACGGCACGCCGGACTCACCAGCCGTGGCCTTGGCTAGCAAAGTCTTAC 2616795 Query 11805 CCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAA 11862 ||||||| || || | ||| | || ||||| || |||||||| || |||| | Sbjct 2616794 CCGTACCAGGAGGCCCGGAGAGGATAGCACCTCGAGGAATCTTGGCTCCGAGCTTCTGGA 2616735 Query 11863 ATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTC 11922 | |||||||||| || | ||| |||| ||| || ||| |||||| | || Sbjct 2616734 --ACCTCTCGGGTTCTTTCAAAAAGCTAACAAACTCCATAATCTCAAGCTTGGCCTCATC 2616677 Query 11923 AATCCCCTCAACATC 11937 || || | ||||| Sbjct 2616676 CATACCGGCGACATC 2616662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031089353600