Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq12 181 3e-40 seq1 172 2e-37 seq11 89.7 2e-12 seq6 87.8 5e-12 >seq12 Length=1121391 Score = 181 bits (200), Expect = 3e-40 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | ||||||||||| |||||||| || || | Sbjct 219808 TTTGCATACCACCACGCAGGCGGAGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGT 219749 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | || || || ||||| || ||||| || |||||||| |||||||| || | Sbjct 219748 AGTCAGAGAGAGTGCGGCCGTCTTCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGT 219689 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| |||||||| || ||||| ||||| | || || || || || | || || | Sbjct 219688 CAGGAGGGATTCCTTCCTTGTCCTGGATTTTCGACTTGACGTTGTCGATGGTGTCGGAAG 219629 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| | ||| | ||||| ||||| || ||||| || ||||||||||| Sbjct 219628 ATTCAACTTCCAATGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574 Score = 129 bits (142), Expect = 2e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 ||||| || | || || || | || || || ||||| || || || || || || || Sbjct 220028 CCACCGCGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 219969 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||| || |||||||| ||||| || ||||||||||| |||||||| || ||||| || Sbjct 219968 AGTGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGG 219909 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || || || || || ||| || ||||| || || | || || | |||||| Sbjct 219908 ATACCCTCCTTGTCTTGGATCTT-GCTCTTCACATTGTCGATTGTGTCTGACGATTCAAC 219850 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | |||||||| || || || || || ||||| ||||| Sbjct 219849 CTCGAGTGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 219802 Score = 114 bits (126), Expect = 4e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || ||||| || |||||||| || || || Sbjct 219576 CATACCACCACGCAGACGAAGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTC 219517 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| || || |||||||| ||||| | ||| || || ||||| Sbjct 219516 CGAGAGAGTGCGGCCGTCTTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGG 219457 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || | || || || || || | || || | || Sbjct 219456 GGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTC 219397 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| | || | ||||| || || || || || || || |||||||| Sbjct 219396 GACTTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 219346 Score = 95.1 bits (104), Expect = 4e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 140553 TGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGA 140612 ||||| || || ||||| | || || || || ||||| ||||| ||||| || || || Sbjct 219247 TGAATGTTGTAGTCAGAAAGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGG 219188 Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || || || || ||||| || ||||| || ||||| || || | || || || || || Sbjct 219187 CGCTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 219128 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 | || || | || || ||||| || | ||||| || || || || || || |||||| Sbjct 219127 GTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATC 219068 Query 140733 TGCAT 140737 ||||| Sbjct 219067 TGCAT 219063 >seq1 Length=6192107 Score = 172 bits (190), Expect = 2e-37 Identities = 478/732 (65%), Gaps = 11/732 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||||| || || || || ||||| || || || ||||||| | | | | |||| | Sbjct 1863869 CCGCTATTGGTATTGACTTGGGTACCACCTACTCGTGTGTTGGTATCTTCCGTGATGACC 1863810 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | ||||| || || | |||||| || | Sbjct 1863809 GCATCGAAATCATTGCCAACGACCAGGGTAACCGCACAACCCCCTCGTTCGTTGCCTTCA 1863750 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| | |||||| | || |||||| | || || || || | || || || | Sbjct 1863749 CCGACAGCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCGGCCA 1863690 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| | || || | | || | ||| || || Sbjct 1863689 ACACAGTCTTCGATGCTAAGCGTTTGATCGGCCGCAAGTTCGCCGACGCTGAAGTC---- 1863634 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| || || || || || | | ||| || | | || || | Sbjct 1863633 CAGGCTGATGCCAAGCACTTCCCCTTCAAGATCGTTGACAAGGCCACC---AAGCCCGTC 1863577 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || ||||| || | || || || || || || ||||||||||| || || ||| Sbjct 1863576 ATCGAGGTCGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAAGAAATCTCTTCCATG 1863517 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | | || ||| || | || || || || | |||| || || | | ||| Sbjct 1863516 GTCCTCATCAAGATGCGTGAGACCGCCGAGGCCTACCTTGGTGGCACCGTCAACAACGCT 1863457 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || |||||||| || || || || || || Sbjct 1863456 GTCATCACTGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGACGCCGGT 1863397 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || || || || || | || || || ||||| || || || || ||||| Sbjct 1863396 CTCATTGCCGGCTTGAACGTCCTCCGTATCATCAACGAACCTACCGCCGCTGCCATTGCC 1863337 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || ||||||| || ||| | |||||| Sbjct 1863336 TACGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTTCTTATCTTCGATCTTGGTGGT 1863277 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 |||||||| ||||| || || || || | || ||||| || || || || || || || Sbjct 1863276 GGTACTTTCGATGTTTCTCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGGCTACC 1863217 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || || ||||| ||||| |||||| ||| || || || || ||| Sbjct 1863216 GCCGGTGACACTCACCTGGGTGGTGAAGACTTTGATTCTCGCCTTGTGAACCACTTCGTT 1863157 Query 349913 AAAGAATTTAAG 349924 |||| || ||| Sbjct 1863156 CAAGAGTTCAAG 1863145 >seq11 Length=1154715 Score = 89.7 bits (98), Expect = 2e-12 Identities = 191/282 (68%), Gaps = 5/282 (2%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || ||||| || ||||| || || || ||||||| || || || ||||| Sbjct 1016032 GCTGTCATCACTGTCCCCGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCC 1015973 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || || || || || | || || || || || || ||||| || ||| Sbjct 1015972 GGTGCCATTGCTGGATTGAACGTCCTCCGTATCATCAACGAGCCTACCGCTGCTGCCATT 1015913 Query 349730 GCATATGGGCTTGATAA---AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || || || || | || | |||| | || ||| | || || | ||||| Sbjct 1015912 GCTTACGGTCTCGGCTCCGGAAAGTCTGACAAGGAGCGCAATGTCCTCATCTACGATTTG 1015853 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | | | || |||| || || Sbjct 1015852 GGTGGTGGTACTTTCGATGTCTCCCTCCTCAACA-TCCAGGGTGGTGTTTTCACTGTCAA 1015794 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 || || |||||||| || || |||||||| | || ||||| Sbjct 1015793 GGCTACCGCTGGTGACACTCACCTTGGTGGTCAGGACTTTGA 1015752 >seq6 Length=2165932 Score = 87.8 bits (96), Expect = 5e-12 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 377443 AATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCA 377502 || ||||||| | || || |||||| | || || ||| || || |||||||||| Sbjct 353210 AAAATTTCTTTTAAACGAGGAACACCAAGAGTGACGTTC---TTGGAACTAACACCAGCA 353154 Query 377503 AAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATA 377562 |||||||| || || || || | ||| || | ||||| ||||| || || || || | Sbjct 353153 AAGTGGAAGGTGTTCAGTGTCATTTGGGTGGCAGGCTCTCCAATAGATTGAGCAGCCAGG 353094 Query 377563 ACGCCAACCATTTCTCCAGGATTG 377586 || ||||||||||| ||||||||| Sbjct 353093 ACACCAACCATTTCACCAGGATTG 353070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252147953148