Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq12 96.9 2e-15 seq2 95.1 8e-15 >seq12 Length=1121391 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| || ||||| ||||| || || || || || || ||||||| Sbjct 219782 ACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCTTCG 219723 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || ||||| |||||||| || | ||| |||||||| || || | ||| |||||||| | Sbjct 219722 AGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCCTGG 219663 Query 34618 ATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| | || ||| | || ||||| || ||||||| || || || || Sbjct 219662 AT-TTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTT 219604 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||||| || ||||||||||| Sbjct 219603 GCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574 Score = 95.1 bits (104), Expect = 8e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | || || | |||||| ||||| || |||||| || ||||| || || Sbjct 220032 GTTGCCACCGCGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 219973 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 || ||||| || | ||||| ||||| || || ||||| || | ||| |||||||| || Sbjct 219972 GGACAGTGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGG 219913 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTT 34622 || | |||||||||||| |||||| Sbjct 219912 TGGGATACCCTCCTTGTCTTGGATCTT 219886 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| ||||| || |||||||||||||| || || || || || || Sbjct 219563 AGACGAAGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGG 219504 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || || || || || |||||||||||||| || || | |||||| Sbjct 219503 CCGTCTTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCCCTCC 219444 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | || ||||| ||| ||||||| ||| Sbjct 219443 TTGTC-CTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAAGGT 219385 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || || || || |||||||| Sbjct 219384 GATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 219346 >seq2 Length=5557896 Score = 95.1 bits (104), Expect = 8e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || || || |||||| || ||||| || || ||||| || || Sbjct 3220782 AGACGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 3220723 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || ||||| || |||| ||| |||||||| || || | |||||| Sbjct 3220722 CCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGACGTTGTTGGTCGGGGGGGATGCCCTCC 3220663 Query 34609 TTGTCTGTGA 34618 ||||||| || Sbjct 3220662 TTGTCTGGGA 3220653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729155051028