Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq2 104 2e-17 >seq12 Length=1121391 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || || | ||||| || | ||| Sbjct 219346 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAAGTCGAGTCTTCC 219405 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 219406 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAA 219465 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || || || |||||||| | || | || || |||||| Sbjct 219466 CAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAAGACGGCCGCACTCTCTCGGACTACAAC 219525 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || ||| | || |||| | ||| |||| ||||| || Sbjct 219526 ATTCAAAAGGAATCTACCCTCCACCTGGTCCTTCGTCTGCGTGGTGGTAT 219575 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| ||||||||| | || || | ||||| ||| | ||| Sbjct 219574 ATGCAGATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCC 219633 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| || ||||| ||||| || || || || ||| Sbjct 219634 GACACCATCGACAACGTCAAGTCGAAAATCCAGGACAAGGAAGGAATCCCTCCTGACCAA 219693 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||||||||| | |||||| | || | || || |||||| Sbjct 219694 CAACGTCTGATCTTTGCCGGCAAACAGCTCGAAGACGGCCGCACTCTCTCTGACTACAAC 219753 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || | || |||||| | || |||| ||||| || Sbjct 219754 ATCCAAAAAGAATCTACTCTTCACTTGGTTCTCCGCCTGCGTGGTGGTAT 219803 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| || ||| |||| || || || || ||| |||| Sbjct 219802 ATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACTATCACACTCGAGGTTGAATCGTCA 219861 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || |||||||| || || || ||||| || ||| Sbjct 219862 GACACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 219921 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || ||||| ||| ||||||| || || | ||||| |||||| Sbjct 219922 CAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACACTGTCCGACTACAAC 219981 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || |||||||||||| | || ||||| | || | || ||||||| Sbjct 219982 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGACTCCGCGGTGGCA 220030 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || || || |||||| | || |||||||| || || | | Sbjct 219061 CCATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCT 219120 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||||| | || || | ||||| || || || ||||| |||||||| || ||||| | Sbjct 219121 CCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACC 219180 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 ||||||| | || | ||| |||||||| | || ||| | ||| |||| || |||| Sbjct 219181 AACAGCGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTTTCTGACTACA 219240 Query 27166 ACATTCA 27172 ||||||| Sbjct 219241 ACATTCA 219247 >seq2 Length=5557896 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || ||||| || ||||| ||||| ||| |||| | ||||||||| || | || Sbjct 3220657 AGACAAGGAGGGCATCCCCCCCGACCAACAACGTCTAATCTTCGCCGGCAAGCAGCTCGA 3220716 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||| | ||| |||| || |||||||| || |||||||||||| | || |||| | Sbjct 3220717 AGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTGCT 3220776 Query 27200 GCGTTTGCGGGGTGG 27214 |||| |||| ||||| Sbjct 3220777 GCGTCTGCGCGGTGG 3220791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917769368320