Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq12 176 1e-38 seq7 138 3e-27 seq2 107 4e-18 >seq12 Length=1121391 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| || |||||||||||||| || || | || || | || ||| Sbjct 219785 AGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCT 219726 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| || ||||| || ||||||||||||||||| | ||||||||||||| Sbjct 219725 TCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCC 219666 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||| ||||||||||| || |||||| || | ||||| ||| Sbjct 219665 TGGATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTC 219606 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || || || | |||||| Sbjct 219605 TTGCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || |||| || || | ||| || || ||||| || |||||||| || || | || || Sbjct 220022 CGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTG 219963 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||| |||||||| || |||||||| |||||||||||||| || | || Sbjct 219962 CGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCC 219903 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 219902 TCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCTGACGATTCAACCTCGAGT 219843 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || || ||||| || || | ||||| Sbjct 219842 GTGATAGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 219802 Score = 158 bits (174), Expect = 3e-33 Identities = 146/185 (79%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989 || ||||| || || | |||||| | || || || ||||| ||||| ||||| || ||| Sbjct 219247 TGAATGTTGTAGTCAGAAAGGGTGCGGCCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGG 219188 Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || |||||||| ||||| | |||||||||||||||||||| || ||||| |||||| Sbjct 219187 CGCTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATG 219128 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 ||||| ||| || ||||| |||||||| ||||| |||||||| ||||| || || | | Sbjct 219127 GTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATC 219068 Query 211110 TGCAT 211114 ||||| Sbjct 219067 TGCAT 219063 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || || || ||||| ||||| || |||| || || | || ||| Sbjct 219557 AGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGGCCGTCT 219498 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| | || ||||||||||| || | || ||||||||| Sbjct 219497 TCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 219438 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || || || || | ||||| ||| Sbjct 219437 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTC 219378 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 219377 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 219346 >seq7 Length=2062375 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| || || ||| || | ||||| || |||||||| || |||||||| Sbjct 1638235 TTCTGAATGTTGTAGTCGCTAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATC 1638294 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| |||||||| || || | ||||||||||||||||||||| || || || ||| Sbjct 1638295 AGGCGCTGTTGGTCGGGGGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1638354 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 1638355 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 1638413 >seq2 Length=5557896 Score = 107 bits (118), Expect = 4e-18 Identities = 111/144 (77%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| |||||| | || ||| Sbjct 3220776 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCT 3220717 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || || | || |||||||| Sbjct 3220716 TCGAGCTGCTTGCCGGCGAAGATTAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCT 3220657 Query 211023 TGGA-TCTTTTGTTTCACGTTTTC 211045 ||| || ||||| ||| ||| Sbjct 3220656 GGGAGAAGTTAGTTTCTCGTGTTC 3220633 Score = 84.2 bits (92), Expect = 5e-11 Identities = 189/283 (67%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 178086 TTCCAAAGTTCTTTTGGTTGC---TCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGG 178142 |||| | |||||||||||||| |||| ||||| ||||| ||||| ||||||| Sbjct 1826809 TTCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTAAAGCATGAAGG 1826865 Query 178143 GCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAG 178202 | |||| ||| | ||||| | ||||| | |||||||| ||||||| ||| | Sbjct 1826866 GGTTTCCAGTCTCCGTCTGAGCTTCCAGAATCGCGTACCAAAGCTTCTGGGCTTTGACGG 1826925 Query 178203 TCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCAT 178262 | | | || || |||||||||||| ||| || | || || || |||| Sbjct 1826926 TGCGTCGACCACGGCCCTCTCTCTCGTACTTTTCGTAAAGAGCATCAAACTCTTCGCCAT 1826985 Query 178263 AGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCT 178322 | ||||| | ||||| || || || ||||| ||||| | |||| | || ||| Sbjct 1826986 ATACATCGGCCAGACCAGGGGCTTCGTTGGGACAGAACAATGTCCAGTCTTGGTTGGCCT 1827045 Query 178323 TCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || ||||||||| || | |||||| | || ||||| Sbjct 1827046 CTACACGGCGCATGAAGAGATCGGGGGTCCACAGAGCGTAGAA 1827088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150277210340