Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 159 8e-34 seq7 127 5e-24 seq42 111 4e-19 seq2 100 7e-16 seq34 95.1 3e-14 >seq12 Length=1121391 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || |||| || || | |||||| || || || || |||| ||||| |||| || || Sbjct 220022 CGGAGTCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGTGTG 219963 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || ||||| ||||| |||||||| ||||||||||| || || ||||| Sbjct 219962 CGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCC 219903 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||||||| ||||| |||||||| | ||| || || | Sbjct 219902 TCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATTGTGTCTGACGATTCAACCTCGAGT 219843 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||| || || | ||| | |||||| Sbjct 219842 GTGATAGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 219802 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| ||||| ||||||||||||| ||||| || | | ||| | || ||| Sbjct 219785 AGAACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCGTCT 219726 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| || ||||||||||| || || || ||||||||||| Sbjct 219725 TCGAGCTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCAGGAGGGATTCCTTCCTTGTCC 219666 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || ||||||||||| || | ||| || || || ||||| ||| Sbjct 219665 TGGATTTTCGACTTGACGTTGTCGATGGTGTCGGAAGATTCAACTTCCAATGTGATGGTC 219606 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | |||||| | ||| | ||||| Sbjct 219605 TTGCCGGTGAGAGTTTTGACGAAAATCTGCAT 219574 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || ||||| ||||| | ||||| || | | ||| | || ||| Sbjct 219557 AGGACCAGGTGGAGGGTAGATTCCTTTTGAATGTTGTAGTCCGAGAGAGTGCGGCCGTCT 219498 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || |||||||| || || || || |||||||| Sbjct 219497 TCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC 219438 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || || ||||| ||| Sbjct 219437 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAAGGTGATGGTC 219378 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 219377 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 219346 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || ||||| || |||||||| || || || ||||||||||| || || |||||| Sbjct 219220 CCGTCCTCAAGCTGTTTGCCAGCGAAAATCAGGCGCTGTTGGTCGGGAGGGATGCCTTCC 219161 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || ||||||||||| |||| || || || | ||| Sbjct 219160 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTG 219101 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||| | || || | ||| | ||||| Sbjct 219100 ATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 219063 >seq7 Length=2062375 Score = 127 bits (140), Expect = 5e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| ||| | ||| | ||||| || |||||||| || |||||||| || || ||| Sbjct 1638244 TTGTAGTCGCTAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGT 1638303 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 |||||||| || || ||||||||||| |||||||| ||| ||| ||||||||||| Sbjct 1638304 TGGTCGGGGGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCG 1638363 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||| || || || | ||||| ||||||||||||| || || | ||| Sbjct 1638364 GAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 1638413 >seq42 Length=11487 Score = 111 bits (122), Expect = 4e-19 Identities = 102/128 (80%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 |||||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 2541 TTGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCC 2600 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACG 7853 |||||| || |||||||||| ||||||||||||||| | | |||| ||| | || | | Sbjct 2601 CCCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATG 2660 Query 7854 CGTTAGCT 7861 |||||||| Sbjct 2661 CGTTAGCT 2668 >seq2 Length=5557896 Score = 100 bits (110), Expect = 7e-16 Identities = 165/236 (70%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || || |||||||| |||| ||||| ||| | | || || |||||| | | Sbjct 5542871 ACTTTGTATTTAATTTTTGCATTATTTTCAGGTTTAGTTGGAACAGCTTTTTCTGTATTA 5542930 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||||| ||||||||| | || || ||| |||| ||| || | ||| ||| | || Sbjct 5542931 ATAAGATTAGAATTATCAGCGCCTGGTGTTCAA-TATATAGCCG--ATAATCAATTATAT 5542987 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| ||||| || ||||| || | |||||||||||| | |||||||| | | | Sbjct 5542988 AATAGTATAATTACAGCTCATGCTATTTTAATGATTTTCTTTATGGTTATGCCTGCTTTA 5543047 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGC 7676 ||||| ||||| || |||| || | |||||| | | || | |||||||||||| Sbjct 5543048 ATAGGAGGTTTTGGTAATTTTTTATTACCTTTATTAGTAGGAGGTCCTGATATGGC 5543103 Score = 91.5 bits (100), Expect = 4e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| || || || || || |||| ||||| || | | || Sbjct 3220785 CGCAGACGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 3220726 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| |||||||| || |||||||| || |||||||||||||| || || || Sbjct 3220725 CGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGACGTTGTTGGTCGGGGGGGATGCCC 3220666 Query 225613 TCCTTGTCTTGGA 225625 ||||||||| ||| Sbjct 3220665 TCCTTGTCTGGGA 3220653 >seq34 Length=22252 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || || |||||||| ||||| ||||| || |||||| |||||| |||| |||| Sbjct 21032 TATGTCAAGCCTTGGTAAGGTTCTTCGCGTTGCGTCGAATTAAGCCACATGCTCCGCCGC 21091 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGG-TG 7842 || | | | |||||| || |||||||||||| |||||||| |||| | | |||| | Sbjct 21092 TTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGG 21151 Query 7843 GAATATTTACGCGTTAGCT 7861 | | || | ||||||||| Sbjct 21152 GGAACTTAATGCGTTAGCT 21170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529427600504