Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20islandicus_20[genbank_20GCA_5F000985935.1_202015-04- 29] 116 sequences; 34,715,840 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq12 174 4e-38 seq7 140 8e-28 seq2 87.8 4e-12 >seq12 Length=1121391 Score = 174 bits (192), Expect = 4e-38 Identities = 164/208 (79%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||||||||| || || || ||||| | || || ||| || ||| Sbjct 219577 CAGATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCCGAC 219636 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || || |||||||| |||||||||||||| ||||| ||| Sbjct 219637 ACCATCGACAACGTCAAGTCGAAAATCCAGGACAAGGAAGGAATCCCTCCTGACCAACAA 219696 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| |||||||||||||| || | ||||| | || || ||| || Sbjct 219697 CGTCTGATCTTTGCCGGCAAACAGCTCGAAGACGGCCGCACTCTCTCTGACTACAACATC 219756 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||||||| || || || |||| || Sbjct 219757 CAAAAAGAATCTACTCTTCA-CTTGGTT 219783 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||| | || || || || ||| Sbjct 219349 CAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACCTTGGAAGTCGAGTCTTCCGAC 219408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || ||||| || ||||| || Sbjct 219409 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAACAG 219468 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| ||||| ||||| ||||| || | ||||| | || || ||| | Sbjct 219469 CGTTTGATCTTCGCTGGAAAGCAGCTGGAAGACGGCCGCACTCTCTCGGACTACAACATT 219528 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || || || Sbjct 219529 CAAAAGGAATCTACCCTCCACCTGGT 219554 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || ||||| || ||||| |||||||| ||| |||||| Sbjct 219805 CAAATTTTCGTCAAGACCCTGACTGGAAAGACTATCACACTCGAGGTTGAATCGTCAGAC 219864 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || ||||| || || ||||| || ||||| ||| Sbjct 219865 ACAATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAACAA 219924 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || || |||||||| | || || |||| || ||| || Sbjct 219925 CGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACACTGTCCGACTACAACATC 219984 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 219985 CAGAAGGAGTCGACCCTCCA-CTTG 220008 Score = 131 bits (144), Expect = 4e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| || ||||| || ||| ||| Sbjct 219066 CAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGAC 219125 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| |||||||| ||||| || Sbjct 219126 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAG 219185 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || |||||||| || || || | || ||| | || || ||| Sbjct 219186 CGCCTGATTTTCGCTGGCAAACAGCTTGAGGACGGCCGCACCCTTTCTGACTACAAC 219242 >seq7 Length=2062375 Score = 140 bits (154), Expect = 8e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || || || || || || |||||||| ||||| || ||| |||||||| Sbjct 1638414 TTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 1638355 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| ||||||||||| || ||||| || || || Sbjct 1638354 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCCCCCGACCAACAGCGCCT 1638295 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||||||||| ||||| || ||||| | |||||| ||| || ||| | || || Sbjct 1638294 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTAGCGACTACAACATTCAGAA 1638235 >seq2 Length=5557896 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || ||||| ||||| || ||||||||||| || ||||||||| Sbjct 3220658 GACAAGGAGGGCATCCCCCCCGACCAACAACGTCTAATCTTCGCCGGCAAGCAGCTCGAA 3220717 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | || ||| | || || ||| |||| || || || || ||||| || || Sbjct 3220718 GACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGT 3220773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729410954504