Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq171 154 3e-32 seq404 89.7 1e-12 >seq171 Length=28483 Score = 154 bits (170), Expect = 3e-32 Identities = 332/486 (68%), Gaps = 18/486 (4%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||| | |||||||||| |||| | | || || ||||| | || ||||| || Sbjct 1907 TTTGGCCAGCGTCTCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCCGGCTCCTT- 1965 Query 230233 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291 ||| |||| || |||||| ||| ||| | ||||| || ||| | | || ||||| Sbjct 1966 TGCTTCCATTTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGA 2025 Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCG---GCGAGCTTATGTATTCAAA 230348 | ||||| ||| ||||||||||| || | || | || |||| | | | | Sbjct 2026 GCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTGCTTTTCTCTC---A 2082 Query 230349 GCTCCAGAACAAGCTACC--ATTCGAG-ACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 ||| ||||| | || || ||| | || || | ||||| || || |||| Sbjct 2083 CCTC---AACAACCGCCCTGATAAGAGGATCGTTGAAGACATCATCGTTGAGGCTGTTGC 2139 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTG 230464 | || | |||||| || ||| ||| |||| || || || ||||||||||||| Sbjct 2140 CATTGAGCAAGAGTTCCTTACTGATGCTCTTCCC-GTTGCACTCCTTGGCATGAACGCCA 2198 Query 230465 AACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACG 230524 | || ||| | ||||||||||| |||||||||||||| || | ||||| || || || Sbjct 2199 AGCTCATGTGCCAGTACATCGAGTTCGTAGCCGACCGTCTTCTGGTTGCTCTCGGCAACA 2258 Query 230525 AGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGA 230584 |||| | |||| | |||||||| | || |||||| ||||| || || | Sbjct 2259 AGAAGTACTTCAACGTCACAAACCCCTTCGACTTCATGGAGTCTATTTCTCTGGCTGGCA 2318 Query 230585 AGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCC 230642 |||||||||||||||| ||||||||| ||||||| |||| | ||||||| ||| ||| Sbjct 2319 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATGGCCAGCA 2378 Query 230643 CGAAGA 230648 |||||| Sbjct 2379 CGAAGA 2384 >seq404 Length=28556 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 319471 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 319530 ||||| || | || ||||| || |||||||| ||||||| || | | ||| | Sbjct 24217 GTGCAGACCTCATCAAGGAATCCAGAGTCGTGACTGACAATCAAGCTGGTGATGTCGGTG 24276 Query 319531 AGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 319590 | || ||| ||| || || |||| ||||||| | ||| | ||||| ||||| Sbjct 24277 TGCTTCTTCAAGTACTCCTGCAGCCACTTCACGTTCGCAACATCCAAGTGGTTAGTCGGT 24336 Query 319591 TCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 319650 |||||||| |||| | | || |||| ||||||||||| || || || | |||||| Sbjct 24337 TCGTCAAGGAGCAACACGTCCGCCTTCATAAGCATTGCACGAGCGAGCGCCAATTTCATC 24396 Query 319651 TTCCACCCTCCGGAAAGAG 319669 ||||| || || ||||||| Sbjct 24397 TTCCAGCCACCCGAAAGAG 24415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810568610330