Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq171 102 1e-16 seq547 98.7 1e-15 >seq171 Length=28483 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| ||||||||||| | | || | |||||||| || ||||| |||||||| || || Sbjct 2053 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACC 1994 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 ||||| || ||||| || ||||| ||||| || || || ||||| || || || || || Sbjct 1993 GCGCTTCTTCAGCCAGAAAATGGAAGCAAAGGAGCCGGAGAAGAAGATACCCTCGACCGC 1934 Query 24269 CGCAAAGGCAA 24279 ||| ||||||| Sbjct 1933 CGCGAAGGCAA 1923 >seq547 Length=32544 Score = 98.7 bits (108), Expect = 1e-15 Identities = 683/1091 (63%), Gaps = 21/1091 (2%) Strand=Plus/Minus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||||| ||||| || || ||||| || || | | ||||| ||||||||||| Sbjct 30642 TCCTGGTCCACAGTGAACTGGATAGGAGCAGAAGCAGCCATGGTACGGAGATAGTACATG 30583 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915 || || || ||||| | |||| || ||| ||||| || || | ||| | Sbjct 30582 CCGGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGCTAGTGATCTTGCCCATGGTA 30523 Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975 || || || ||||| || | ||| || |||||||||||||| || | ||| ||| Sbjct 30522 GGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCGATGAAGGCACCACGGTCAGCA 30463 Query 52976 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 53035 ||||| | | ||| || || | |||||||||| ||| || || | ||| ||| Sbjct 30462 GCCATCTGCAAGATTGTGCGCTGGGAGATTTCCCAAACAGTCTTGTAGAGGGCCTTGATA 30403 Query 53036 TCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092 || | |||| ||| | | || || | ||| || || || | || || | ||||| Sbjct 30402 TCCGCCGGAATGTTGGGTATGTTTTGGACAGAGCCTCCTTCGGCGATGATGCGGTTCTTC 30343 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || | ||| ||| | ||| | | | || || ||||| || ||| Sbjct 30342 ATGTTGTCAGACCAGAGACCAAGGTCGACGAGGTCCTTGAGAAGCCAAGGATTGACAACT 30283 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || ||||| |||| | || | || | |||||||| ||||| || || | | Sbjct 30282 TGGAATTCGCCAGCAAGGACACGGCGCGAATAAATATTGGAAGTATATGGCTCAAAGCAT 30223 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 || || || | ||||| ||| |||||| |||||||| ||||| | ||||| Sbjct 30222 TCGTTGAAGCCGAGGATTTGGCTAGTGCTTGCAGTGGGCATAGGAGCCACGAGCAAACTG 30163 Query 53273 TTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 53331 || | | ||||| ||| | || || | || || | ||||| | ||| || || | Sbjct 30162 TTGCGTACACCGTGCTGTGCA-ATCTTCGCCTTCAGCGCGTCCCAGTCCCAGAGGTCAGT 30104 Query 53332 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 53391 ||| || ||||| || | | | || ||| |||| Sbjct 30103 GGGTGTTCTATCCCACATGTCGTACTGGAGAATGCCTTGGGAGACAGGGGAGCCTTCATA 30044 Query 53392 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 53451 || ||||| || |||| | || || || ||| ||| || || |||| ||| Sbjct 30043 AGTCTCGTAGGGACCTTGTTCCTTCGCAAGCTCAACGGAAGCCGTCAAGGCGCCGTGATA 29984 Query 53452 AATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCT--ATCAAATGGATA 53508 ||||| ||||| |||| | || || | |||| || || ||| |||||| || Sbjct 29983 GATGGTCTCGAAAATCTGAATGTTGAGCTGCTTG-GCCTC--GGCAGAATCAAACGGCAG 29927 Query 53509 ATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 | | ||| || || || || || | || | ||||| | | | ||||| | ||| | Sbjct 29926 ACGCA-GAGCAAGGAAAGCATCCGCAAGGCCATTGACACCGACAGCAATAGGGCGATGAC 29868 Query 53568 TCTTATTAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 53626 | ||| | || | | |||| |||| ||| ||||| || || || || || || || Sbjct 29867 GCAGATT-GCTCTTCCTGGCTTCAGGAACAGGGTAATAGTTGATGTCGATGATCTTGTTC 29809 Query 53627 AGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCT 53686 ||||| | |||| |||| || || || | || ||| ||| || | | || Sbjct 29808 AGGTTGCGAACAAGAACTTGCACAACCTCGTGGAGCTTGCCAAAGTCGTACTCGCCGCGG 29749 Query 53687 ATTACA--AAC--ATGTTCAATG--CAATAGATGCCAGATTACAAACGGCTACCTCATTA 53740 || ||| |||| | | ||||||| || || ||||| ||||| ||||||| Sbjct 29748 GCAGCATCAACGAATGTAGGAAGGGCAATAGAAGCAAGGTTACACACGGCGACCTCATCC 29689 Query 53741 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 53800 | | |||| || ||||||||||| || || | ||||||||| | ||| Sbjct 29688 GGGGCACTGTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTTCCGAGATTC 29629 Query 53801 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCA 53860 | || || |||||||||||||| |||||||| || || ||||| || | || || || Sbjct 29628 TTCTGGTTGCTCTTTTTGTTACAGGCATCCTTGTACAGCATGAAGGGGTTTCCGGTCTCG 29569 Query 53861 ATCTGGGATTC 53871 |||||| ||| Sbjct 29568 GTCTGGGCTTC 29558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714245273680