Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq171 163 3e-35 seq381 123 3e-23 seq260 109 6e-19 seq655 98.7 1e-15 >seq171 Length=28483 Score = 163 bits (180), Expect = 3e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||||||||| | || ||||| | || ||| | |||| ||| |||| | Sbjct 1860 AGAAGGCCGAGTGGGCCATCCGTTGGATTCAAGACAAGGAGTCTACCTTTGGCCAGCGTC 1919 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||||||||| |||||||| ||||||| || ||| || || |||| || | Sbjct 1920 TCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCCGGCTCCTTTGCTTCCATTTTCT 1979 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| ||||| ||||||||||| || |||||| ||||||||||||||| | | Sbjct 1980 GGCTGAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 2039 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199 |||||||||| || |||||||| || |||| ||| Sbjct 2040 ACGAGGGTCTTCACACTGACTTTGCTTGCCTGCTTTTC 2077 Score = 158 bits (174), Expect = 1e-33 Identities = 208/285 (73%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||||| ||| || | |||||| Sbjct 1455 ATCTGGCAAATGTACAAGAAGGCTGAAGCTTCTTTCTGGACCGCCGAAGAAATTGACCTG 1514 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || ||||||| | || |||| || |||||||| | |||||| Sbjct 1515 TCGAAAGATCTTCACGACTGGAATAATCGGCTGAATGATGACGAGCGCTACTTCATCTCC 1574 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811 ||||| || ||||| |||||||| ||||||||||||||| ||||| ||||| ||||| Sbjct 1575 CACGTCCTTGCCTTCTTCGCCGCTTCCGACGGCATCGTCAATGAGAACCTGGTGGAGCGC 1634 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | || | ||| | | || || || |||||||| ||||| |||||| || Sbjct 1635 TTTAGCGGA-GAAATTCAGATCCCTGAAGCTCGTTGCTTCTATGGCTTCCAGATCATGAT 1693 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||| | ||||| || | || || ||||||||||| || Sbjct 1694 GGAGAACATCCACTCTGAGACTTACTCTCTGCTCATCGACACATA 1738 >seq381 Length=79381 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 61805 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 61746 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| |||||||| ||| | |||||||| || | Sbjct 61745 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTTT 61687 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || |||||||| || || | ||||| || | |||||||||||||||||| Sbjct 61686 GATCTTCGCCGGAAAACAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 61627 Query 40878 GG 40879 || Sbjct 61626 GG 61625 >seq260 Length=52326 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| || || | || Sbjct 28550 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCC 28491 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||| || || | ||||| |||||||||||| | |||||| Sbjct 28490 GATACTATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 28431 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || |||||||| || | ||||| || ||||||||| Sbjct 28430 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 28371 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||| | ||||| || || || |||| Sbjct 28370 ATTCAGAAGGAATCTACGCTTCACCTGGTCCTGCG 28336 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || ||||| || || ||| | || || || | | Sbjct 28094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACTATTACCTTGGAGGTTGAGAGCTCA 28035 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| || ||||| || |||| || Sbjct 28034 GACACCATCGATAACG-TGAAGAGCAAGATTCAAGACAAGGAAGGCATTCCTCCGGATCA 27976 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| || || || ||||||||| Sbjct 27975 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAAGACGGACGTACGCTTTCCGACTACAA 27916 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| |||| Sbjct 27915 TATCCAGAAGGAGAGCACCTTGCA 27892 >seq655 Length=54813 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | ||||| || || || |||| ||| ||||| ||||| || Sbjct 16183 GACAAGGAGGGTATCCCCCCCGACCAACAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 16242 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || || ||| | Sbjct 16243 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTC 16302 Query 40903 CGCTTGAGGGGCGG 40916 ||| || | || || Sbjct 16303 CGCCTGCGTGGTGG 16316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515212817722160