Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq260 114 1e-20 seq381 93.3 5e-14 >seq260 Length=52326 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| |||| || || || |||| || |||||||| |||||||| Sbjct 28587 CTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28646 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 28647 GATCAAACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 28706 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | |||||||| |||||||| |||| |||||||| ||||| || Sbjct 28707 ATCGATGGTGTCGCTAGATTCCACCTCGAGGGTGATGGTCTTGCCGGT 28754 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||| || | |||||| || | || || ||||||||||||||||| Sbjct 28360 TCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 28419 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 28420 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTG 28479 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || ||| || ||||| |||| ||||| || ||||| || || ||||| || Sbjct 28480 TCGATAGTATCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACG 28539 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 28540 AAGATCTGCAT 28550 Score = 104 bits (114), Expect = 3e-17 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| ||||||||||| || |||||||| || | || || || |||| || Sbjct 27886 ACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGTCCGTCTTCA 27945 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||||||||| ||||| |||||||| || | || | || ||||||| | || Sbjct 27946 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGT-CTTG 28004 Query 43095 ATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | | || | || | | | | ||||| |||| || || || | || || || Sbjct 28005 AATCTTGCTCTTCACGTTATCGATGGTGTCTGAGCTC---TCAACCTCCAAGGTAATAGT 28061 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | |||||| || ||||| ||||| Sbjct 28062 CTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 28094 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || |||||||| ||||| || | || || || | || || | |||||| |||||||| Sbjct 28132 TCTTTTTGAATGTTGTAGTCGGACAAGGTACGACCATCTTCCAACTGCTTGCCAGCGAAA 28191 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||||| || | | ||||||||| ||| || || | | Sbjct 28192 ATAAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 28251 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || ||| || || || |||| ||||| || ||||| || || ||||| ||| Sbjct 28252 TCGATAGTATCGGAAGACTCAACCTCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACA 28311 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 28312 AAGATCTGCAT 28322 >seq381 Length=79381 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || |||||| || | || || ||||| || || ||||| | Sbjct 61625 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGA 61684 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | | ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 61685 TCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 61743 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 61744 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 61803 Query 43173 AAG 43175 ||| Sbjct 61804 AAG 61806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810516609480