Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq260 140 2e-28 seq655 84.2 1e-11 >seq260 Length=52326 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || |||||| || ||||||||||||||| Sbjct 28096 CCACCGCGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGAC 28155 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || |||||||||||||| |||||||| || |||||||||||| || Sbjct 28156 AAGGTACGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGG 28215 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | ||||| || || || Sbjct 28216 ATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAACC 28275 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || |||||||||||||| Sbjct 28276 TCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| |||||||| | ||| ||| ||||| ||||||||||| ||| Sbjct 28324 CCACCACGGAGACGCAGGACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCCGAC 28383 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 28384 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 28443 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | ||||| || || || Sbjct 28444 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCCACC 28503 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || |||||||||||||| || || ||||||||||| Sbjct 28504 TCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || |||| || |||| ||| || || || || ||||| || ||||||||||| Sbjct 27867 TCCACCACGGAGCCGAAGAACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGA 27926 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| |||| || | |||||| || ||||| ||||| |||||||| || || Sbjct 27927 AAGCGTACGTCCGTCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGG 27986 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TT 34337 | || |||||||| ||||| ||| | | |||||| ||| || | Sbjct 27987 AATGCCTTCCTTGTCTTGAATCTTGCTCTTCA----CGTTATCGATGGTGTCTGAGCTCT 28042 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || |||| || || || |||||||| | || || || ||||||||||| Sbjct 28043 CAACCTCCAAGGTAATAGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 28094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| || |||||||| || Sbjct 28552 CCACCGCGAAGGCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAG 28611 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| || | ||||||||||| || Sbjct 28612 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGA 28671 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | || | ||| | ||||| || Sbjct 28672 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTAGATTCCACC 28731 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 28732 TCGAGGGTGATGGTCTTGCCGGTGA 28756 >seq655 Length=54813 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || ||||| ||||||||||| || Sbjct 16316 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 16257 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| || || ||||| |||||| ||| Sbjct 16256 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCGGGGGGG 16197 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 16196 ATACCCTCCTTGTC 16183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068097996960