Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq171 102 1e-16 seq547 89.7 7e-13 >seq171 Length=28483 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| ||||||||||| | | || | |||||||| || ||||| |||||||| || || Sbjct 2053 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACC 1994 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 ||||| || ||||| || ||||| ||||| || || || ||||| || || || || || Sbjct 1993 GCGCTTCTTCAGCCAGAAAATGGAAGCAAAGGAGCCGGAGAAGAAGATACCCTCGACCGC 1934 Query 36292 CGCAAAGGCAA 36302 ||| ||||||| Sbjct 1933 CGCGAAGGCAA 1923 >seq547 Length=32544 Score = 89.7 bits (98), Expect = 7e-13 Identities = 680/1091 (62%), Gaps = 21/1091 (2%) Strand=Plus/Minus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||||| ||||| || || ||||| || || | | ||||| ||||||||||| Sbjct 30642 TCCTGGTCCACAGTGAACTGGATAGGAGCAGAAGCAGCCATGGTACGGAGATAGTACATG 30583 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 || || || ||||| | |||| || ||| ||||| || || | ||| | Sbjct 30582 CCGGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGCTAGTGATCTTGCCCATGGTA 30523 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 || || || ||||| || | ||| || |||||||||||||| || | ||| ||| Sbjct 30522 GGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCGATGAAGGCACCACGGTCAGCA 30463 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||| | | ||| || || | |||||||||| ||| || || | ||| ||| Sbjct 30462 GCCATCTGCAAGATTGTGCGCTGGGAGATTTCCCAAACAGTCTTGTAGAGGGCCTTGATA 30403 Query 65067 TCTTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 || | |||| ||| | | || || | || || || || || || || | ||||| Sbjct 30402 TCCGCCGGAATGTTGGGTATGTTTTGGACAGAGCCTCCTTCGGCGATGATGCGGTTCTTC 30343 Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 65183 || | ||| ||| | ||| | | | || || ||||| || ||| Sbjct 30342 ATGTTGTCAGACCAGAGACCAAGGTCGACGAGGTCCTTGAGAAGCCAAGGATTGACAACT 30283 Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243 || ||||| |||| | || | || | |||||||| ||||| || || | | Sbjct 30282 TGGAATTCGCCAGCAAGGACACGGCGCGAATAAATATTGGAAGTATATGGCTCAAAGCAT 30223 Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 65303 || || || | ||||| ||| |||||| |||||||| ||||| | ||||| Sbjct 30222 TCGTTGAAGCCGAGGATTTGGCTAGTGCTTGCAGTGGGCATAGGAGCCACGAGCAAACTG 30163 Query 65304 TTTCTAAGACCGT-ATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGA 65362 || | | ||||| ||| | || || | || || | ||||| | ||| || || | Sbjct 30162 TTGCGTACACCGTGCTGTGC-AATCTTCGCCTTCAGCGCGTCCCAGTCCCAGAGGTCAGT 30104 Query 65363 CGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATA 65422 ||| || ||||| || | | | || ||| |||| Sbjct 30103 GGGTGTTCTATCCCACATGTCGTACTGGAGAATGCCTTGGGAGACAGGGGAGCCTTCATA 30044 Query 65423 TGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATA 65482 || ||||| || |||| | || || || ||| ||| || || |||| ||| Sbjct 30043 AGTCTCGTAGGGACCTTGTTCCTTCGCAAGCTCAACGGAAGCCGTCAAGGCGCCGTGATA 29984 Query 65483 AATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTC--CAGGCTATCAAATGGATA 65539 ||||| ||||| |||| | || || | |||| || || ||| |||||| || | Sbjct 29983 GATGGTCTCGAAAATCTGAATGTTGAGCTGCTTG-GCCTCGGCAG--AATCAAACGG-CA 29928 Query 65540 ATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 |||| || || || || || | || | ||||| | | | ||||| | ||| | Sbjct 29927 GACGCAGAGCAAGGAAAGCATCCGCAAGGCCATTGACACCGACAGCAATAGGGCGATGAC 29868 Query 65599 TCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 65657 | ||| | || | ||||| |||| ||| ||||| || || || || || || || Sbjct 29867 GCAGATT-GCTCTTCCTGGCTTCAGGAACAGGGTAATAGTTGATGTCGATGATCTTGTTC 29809 Query 65658 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCGC----- 65711 || || | |||| |||| || || || | || ||| ||| || | |||| Sbjct 29808 AGGTTGCGAACAAGAACTTGCACAACCTCGTGGAGCTTGCCAAAGTCGTACTCGCCGCGG 29749 Query 65712 TCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 65771 || | || || | | |||| ||| || || ||||| ||||| ||||||| Sbjct 29748 GCAGCATCAACGAATGTAGGAAGGGCAATAGAAGCAAGGTTACACACGGCGACCTCATCC 29689 Query 65772 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 65831 | | |||| || ||||||||||| || || | ||||||||| | ||| Sbjct 29688 GGGGCACTGTATTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTTCCGAGATTC 29629 Query 65832 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 65891 | || || |||||||||||||| |||||||| || || ||||| || | || || || Sbjct 29628 TTCTGGTTGCTCTTTTTGTTACAGGCATCCTTGTACAGCATGAAGGGGTTTCCGGTCTCG 29569 Query 65892 ATCTGAGATTC 65902 |||| | ||| Sbjct 29568 GTCTGGGCTTC 29558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164646884440