Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq260 107 2e-18 seq171 82.4 8e-11 >seq260 Length=52326 Score = 107 bits (118), Expect = 2e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 |||||| ||||| |||||||| |||| ||||| |||||||| ||||| |||||||| || Sbjct 27939 GTCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTT 27998 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 ||| ||| | || | || | | || | ||||| | | ||| ||||| | ||| | Sbjct 27999 GTCT-TGAATCTTGCTCTTCACGTTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAA 28057 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||||||||| || ||||| || |||||| Sbjct 28058 TAGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATA 28095 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | ||||| |||||| || || |||||||| || || Sbjct 28323 GCCACCACGGAGACGCAGGACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCCGA 28382 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| || || ||||| |||||||| ||||||| || ||||| || || || Sbjct 28383 CAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGG 28442 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | || |||| | |||||| Sbjct 28443 GATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCCAC 28502 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||||||| | || || ||||| || ||||| Sbjct 28503 CTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||||| || || |||||||||||||| || ||| | Sbjct 28096 CCACCGCGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGAC 28155 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | ||| || ||||| | || ||||| ||||| |||||||| Sbjct 28156 AAGGTACGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGG 28215 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | || |||| | ||| ||| Sbjct 28216 ATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAACC 28275 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||||||||| | || || || || || ||||| Sbjct 28276 TCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 >seq171 Length=28483 Score = 82.4 bits (90), Expect = 8e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | |||||| ||||||| |||| || ||| | ||||| || | | ||| Sbjct 2129 GAGGCTGTTGCCATTGAGCAAGAGTTCCTTACTGATGCTCTTCCCGTTGCACTCCTTGGC 2188 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | | |||||| ||||||||||||| || || ||| | || || | Sbjct 2189 ATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTAGCCGACCGTCTTCTGGTTGCT 2248 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| |||| || | |||||||| || ||| | || || Sbjct 2249 CTCGGCAACAAGAAGTACTTCAACGTCACAAACCCCTTCGACTTCATGGAGTCTATTTCT 2308 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 2309 CTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 2353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057855007200