Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq547 197 2e-45 seq171 96.9 5e-15 >seq547 Length=32544 Score = 197 bits (218), Expect = 2e-45 Identities = 565/862 (66%), Gaps = 10/862 (1%) Strand=Plus/Minus Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATC 72041 |||||||||||| | | | ||| || |||| | | ||||| ||||| || ||||| Sbjct 29382 TTCATTCGGACAGAAAAGCGTCCAGTCGCCATTTGCCTCAACTCGCTTCATGAAAAGATC 29323 Query 72042 AGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 72100 ||| |||| ||||| || || || || | | ||| ||| || || || ||||| Sbjct 29322 GGGAGTCCAGAGAGCGTAGAACAAG-TCACGAGCTCTGATCTCTTCCTTGCCGTGATTCT 29264 Query 72101 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 72160 | ||||| | |||| | | |||||| | |||||| || || | ||| || || | | Sbjct 29263 TACGGAGATCCAAGAACTCGAAAATATCGGCATGCCAAGGCTCAAGGTAGATAGCAAAAG 29204 Query 72161 CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 72220 | ||||| || |||||||| || || || | ||||| || ||||| || |||||| | Sbjct 29203 CACCCGGACGCTTGTTTCCACCTTGGTCGACATATCTCGCAGTGTTGTTGAAAACTCGGA 29144 Query 72221 ACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 72280 ||| ||||| |||||||| || | ||||||||| || | ||| ||| || |||||| Sbjct 29143 GCATAGGAATGATACCATTAGAGGAACCATTGGTTCCAGCGATGTAGGAACCCGTGGCAC 29084 Query 72281 GAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 72338 | || ||| |||| ||||| || || || || | || ||||| | || || Sbjct 29083 GGATTCTGTGCACATTG--AGACCGATGCCACCGGCACTCTTGGAGATCATGGCACAAGT 29026 Query 72339 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 || | || |||||||| ||||| || || || ||| |||||| || | || || Sbjct 29025 CTTCAGGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAAGA 28966 Query 72399 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 72458 | || || || | ||| || || || || ||||| ||||| || || || || | Sbjct 28965 GGCCAGCTGCGGATGGGGAGTACCAGCGTTGAACAAGGTGGGAGAGGCATGTGTGAAGTA 28906 Query 72459 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCC 72518 ||| | ||||| | | || ||||| || || || ||||| | || ||||| Sbjct 28905 TTTCTGAGACATCAAGTGATAGGTCTCGATGGCCTTCTCGATATCGTTTCCGTGAATTCC 28846 Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578 || || || ||||| |||| || || || | || | | || || || || | Sbjct 28845 AACTGCAACTCGCATCAACAGGTGTTGGGGACGCTCCGCAACTTTCCCGTTGATCTTGAG 28786 Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 72636 | ||| || || | || || || || || |||||||| ||||| || || || Sbjct 28785 TAGGTATGAACGCTCGAGTGTCTTGAATCCGAAGTAGTTGTAGTTGAAA--TCGCGGTCA 28728 Query 72637 TAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 72696 || | ||| | || || || | ||| | ||| |||| || || || || Sbjct 28727 TAGACGATAGCAGAGTTAAGCTCATCTGCGTGTTTCATAACGATTTCATATGTCTCCTTT 28668 Query 72697 GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATC 72756 || || ||||| || | || || || || || ||||| | | | | |||| ||| Sbjct 28667 GAGATCATCGGTGATGGCTTGTTGTTCTTTGGGTTGACATAATGGTAGAGATCCGAGATC 28608 Query 72757 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 72816 ||| || | || || |||| |||||| || || || || ||||| | ||| || Sbjct 28607 ACTAGGGAGAACTGCTTCTTCGTTTGCTTGTGGAGGTTCGAGACAGCTATGCGGGCAGCA 28548 Query 72817 AGAATGGCATAATCTGGATGTT 72838 || |||||||| |||||||||| Sbjct 28547 AGGATGGCATAGTCTGGATGTT 28526 Score = 100 bits (110), Expect = 4e-16 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 70785 TTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTA 70844 || ||||| ||||| || ||||| || |||| || || || | ||||| |||||||| Sbjct 30646 TTGTTCCTGGTCCACAGTGAACTGGATAGGAGCAGAAGCAGCCATGGTACGGAGATAGTA 30587 Query 70845 CATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATA 70904 |||||| || || ||||| | |||| || ||| ||||| || || | ||| Sbjct 30586 CATGCCGGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGCTAGTGATCTTGCCCAT 30527 Query 70905 GCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTC 70964 | |||| || ||||| || || | ||||| |||||||||||||| || | ||| Sbjct 30526 GGTAGGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCGATGAAGGCACCACGGTC 30467 Query 70965 TGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT 71024 |||||||| | | ||| || || | |||||||||| ||| || || | ||| Sbjct 30466 AGCAGCCATCTGCAAGATTGTGCGCTGGGAGATTTCCCAAACAGTCTTGTAGAGGGCCTT 30407 Query 71025 AATATCTTCTGGAAGGTT 71042 ||||| | |||| ||| Sbjct 30406 GATATCCGCCGGAATGTT 30389 >seq171 Length=28483 Score = 96.9 bits (106), Expect = 5e-15 Identities = 141/196 (72%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||| |||||||| || | | || | |||||||| || ||||| |||||||| || || Sbjct 2053 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACC 1994 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 ||||| || ||||| || || || ||||| || || || |||||||| || || || || Sbjct 1993 GCGCTTCTTCAGCCAGAAAATGGAAGCAAAGGAGCCGGAGAAGAAGATACCCTCGACCGC 1934 Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA-CTTTTGAG 42254 ||| ||||||| || | || ||| | | | |||| || ||||| | || | Sbjct 1933 CGCGAAGGCAACGAGACGCTGGCCAAAGGTAGACTCCTTGTCTTGAATCCAACGGATG-G 1875 Query 42255 CCCAATCGGCCTTCTT 42270 |||| ||||||||||| Sbjct 1874 CCCACTCGGCCTTCTT 1859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130886263160