Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq260 111 4e-19 >seq260 Length=52326 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| || ||||||||||| |||||||| || || | ||||| Sbjct 28566 AAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTC 28625 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||| || || | | ||| || || ||||| || || || || || Sbjct 28626 CTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 28685 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || || || || | ||| ||||||| ||| ||||| || || || || Sbjct 28686 CTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTAGATTCCACCTCGAGGGTGATGGT 28745 Query 104527 CTTACCAGT 104535 ||| || || Sbjct 28746 CTTGCCGGT 28754 Score = 105 bits (116), Expect = 2e-17 Identities = 170/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 104326 ATTTA--TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 ||||| |||| || | |||| ||| || | || || || || ||||| ||||| Sbjct 27859 ATTTAGTTTCCACCACGGAGCCGAAGAACCAAGTGCAAGGTGCTCTCCTTCTGGATATTG 27918 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 ||||| || || || | |||||||| || || || ||||| || || || | ||| ||| Sbjct 27919 TAGTCGGAAAGCGTACGTCCGTCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGA 27978 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCT 104502 || ||||| || ||||| || || |||||||| ||| || || || || | ||| || Sbjct 27979 TCCGGAGGAATGCCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTATCGATGGTGTCTG- 28036 Query 104503 AGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || ||||| | ||||||||||| || || | || || || || |||||||| Sbjct 28037 AGCTCTCAACCTCCAAGGTAATAGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 28094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151383780478628