Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11-
26] 991 sequences; 25,946,254 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq260 111 4e-19
>seq260
Length=52326
Score = 111 bits (122), Expect = 4e-19
Identities = 138/189 (73%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | ||||| || ||||||||||| |||||||| || || | |||||
Sbjct 28566 AAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTC 28625
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || || ||||| || || | | ||| || || ||||| || || || || ||
Sbjct 28626 CTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTC 28685
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||| ||||| | || || || || | ||| ||||||| ||| ||||| || || || ||
Sbjct 28686 CTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTAGATTCCACCTCGAGGGTGATGGT 28745
Query 104527 CTTACCAGT 104535
||| || ||
Sbjct 28746 CTTGCCGGT 28754
Score = 105 bits (116), Expect = 2e-17
Identities = 170/238 (71%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 104326 ATTTA--TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383
||||| |||| || | |||| ||| || | || || || || ||||| |||||
Sbjct 27859 ATTTAGTTTCCACCACGGAGCCGAAGAACCAAGTGCAAGGTGCTCTCCTTCTGGATATTG 27918
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
||||| || || || | |||||||| || || || ||||| || || || | ||| |||
Sbjct 27919 TAGTCGGAAAGCGTACGTCCGTCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGA 27978
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCT 104502
|| ||||| || ||||| || || |||||||| ||| || || || || | ||| ||
Sbjct 27979 TCCGGAGGAATGCCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTATCGATGGTGTCTG- 28036
Query 104503 AGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| | || ||||| | ||||||||||| || || | || || || || ||||||||
Sbjct 28037 AGCTCTCAACCTCCAAGGTAATAGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 28094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151383780478628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |