Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq10 140 2e-28 seq260 107 1e-18 seq14 84.2 1e-11 >seq10 Length=4434 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3024 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2965 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2964 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2930 >seq260 Length=52326 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || | ||||||||||| || |||||||| || || | |||| |||| || Sbjct 27886 ACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGTCCGTCTTCA 27945 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || || || || || || || || ||||| | || | |||||| ||||| | Sbjct 27946 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGA 28005 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || |||||| || | || || ||| || ||||| || || |||||||| || Sbjct 28006 ATCTTGCTCTTCACGTTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTG 28065 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| || || ||||| |||||||| Sbjct 28066 CCGGTCAACGTCTTGACGAAGATCTGCAT 28094 >seq14 Length=98874 Score = 84.2 bits (92), Expect = 1e-11 Identities = 199/301 (66%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246 |||| | ||| | |||||||||||||||||| ||| || ||||| |||| || | Sbjct 26756 ATGTCACCGACCCCTTCTACCGCTACAAAATGGAGCGTCTCCAGTCCAAGATCGAAGGCA 26697 Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC 6306 | || ||||| || || ||||| | |||||| || || || || | ||| | | Sbjct 26696 AAGGCAACGGCATCAAGACCGTTGTCGTCAACTTGAACTCGGTTGCCCAGTCTCTCAGCC 26637 Query 6307 GCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTG 6366 | ||| | |||| || || || || || | || || || |||||| || | Sbjct 26636 GACCTCCAGCCTATGTGATCAAGTACTTTGGATTTGAGCTGGGTGCTCAGGCGAACGCGA 26577 Query 6367 ATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACT 6426 | | | | || |||| ||| | ||||| | || || || ||||||| ||||| | Sbjct 26576 AGCCTACTGATGACCGCTGGATCATCAACGGCGCTCACGACGCTCCCAAGCTTCAGGATT 26517 Query 6427 TACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 || ||||| || ||| |||||| ||||| || | | ||| | ||||| ||||| | Sbjct 26516 ACCTCGACGGATTCATTGCCAAGTTCGTGCTTTGCAAGAAGTGCAAGAACCCCGAGACTG 26457 Query 6487 A 6487 | Sbjct 26456 A 26456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943154570521