Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq260 136 3e-27 seq655 84.2 2e-11 >seq260 Length=52326 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || | ||||| || || |||| || || || || | || Sbjct 28322 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTTGAGTCTTCC 28263 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || || || |||||||||||||| || || ||||| || Sbjct 28262 GATACTATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 28203 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || ||||| ||||| || ||| || ||| | ||||| |||||| Sbjct 28202 CAGCGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGTCGTACCTTGTCCGACTACAAC 28143 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||| ||| | || | ||| | || | ||||| ||| Sbjct 28142 ATTCAAAAAGAATCGACCCTTCACCTTGTTCTTCGTCTCCGCGGTGGT 28095 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || ||| ||||||| || ||||| | || Sbjct 28550 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCC 28491 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || || || || ||||||||||| || || || || || Sbjct 28490 GATACTATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 28431 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | |||||| |||||| | || || |||||| Sbjct 28430 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 28371 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || ||||| || Sbjct 28370 ATTCAGAAGGAATCTAC 28354 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || |||||| | | ||| ||| | || | |||| Sbjct 28754 ACCGGCAAGACCATCACCCTCGAGGTGGAATCTAGCGACACCATCGATAACGTCAAGTCG 28695 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || ||| | || || || ||||| Sbjct 28694 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTTTGATCTTCGCTGGCAAG 28635 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| |||| || ||||| ||||| || || || ||| Sbjct 28634 CAGCTTGAGGACGGCCGTACCCTCTCTGACTACAATATTCAGAAGGAGTCTACC 28581 >seq655 Length=54813 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || ||||| ||||| ||||| || || || ||||| ||| | || Sbjct 16182 AGACAAGGAGGGTATCCCCCCCGACCAACAGCGTCTGATCTTCGCTGGCAAGCAGCTCGA 16241 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| ||| || | || || |||||||| || || || |||||| Sbjct 16242 GGACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACC 16287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722930603915