Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq171 118 2e-21 seq600 102 2e-16 >seq171 Length=28483 Score = 118 bits (130), Expect = 2e-21 Identities = 288/428 (67%), Gaps = 14/428 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| ||||||| || ||||||||||||||||||||||||| Sbjct 2334 TCGAAGAAGTTGGTCTTGCCAGCCAGAGAAATAGACTCCATGAAGTCGAAGGGGTTTGTG 2275 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTAC--GAAGATGCGGTCTGCCACAAACT 251677 | ||| |||| |||| | ||| || || || ||||| ||||| || || |||| Sbjct 2274 ACGTTGAAGTACTTCTTG---TTGCCGAGAGCAACCAGAAGA--CGGTCGGCTACGAACT 2220 Query 251678 CCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCA 251736 | | ||||| | ||| || | | ||||||||||| | | | || |||| || ||| Sbjct 2219 CGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGGAGTGCAAC-GGGAAGAGCATCA 2161 Query 251737 CAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC-CAG 251795 | ||| || | || ||||||| ||||| | | | || ||||| | | | | Sbjct 2160 GTAAGGAACTCTTGCTCAATGGCAACAGCCTCAACGATGA-TGTCTTCAACGATCCTCTT 2102 Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855 | | ||| | || | ||| | || || |||| | ||| |||||||| Sbjct 2101 ATCAGGGCGGTTGTTGAGGTGAGAGAAAAGCAGGCAAGCAAAGTCAGTGTGAAGACCCTC 2042 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| ||| ||||| ||||||||| | | || || ||||| | || || ||| | || Sbjct 2041 GTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCGCGCTTCTTCAG 1982 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 |||||| || | |||||| || ||||| | | ||||||||| | | | ||||| Sbjct 1981 CCAGAAAATGGAAGCAAAGGAGCCGGAGAAGAAGATACCCTCGACCGCCGCGAAGGCAAC 1922 Query 251976 AAGGCGCT 251983 || |||| Sbjct 1921 GAGACGCT 1914 >seq600 Length=17529 Score = 102 bits (112), Expect = 2e-16 Identities = 125/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| ||||| | | ||||| ||||| |||||||| || || | Sbjct 5367 CCAACTTCGGTCTTGACGCCGAGCTGGTTTCCCACTCCCGCATGCGCGGTCTGTCCGGTG 5426 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| ||||| | | || |||| |||||| | |||||||| ||||| Sbjct 5427 GTCAGCGTGTCAAGGTTGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACGTCATCGTC 5485 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 |||||||||||||||||||| || ||||| || ||| || |||||| Sbjct 5486 CTCGACGAGCCTACCAACTACCTCGACCGTGACTCCCTCGGTGCTCTG 5533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823749363431